RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LINC01549A6NIU2 74 aa17.94■□□□□ 0.46
DNMT3A-206ENST00000406659 TRAV12-1A0A0B4J245 112 aa17.93■□□□□ 0.46
DNMT3A-206ENST00000406659 ERASQ7Z444 233 aa17.93■□□□□ 0.46
DNMT3A-206ENST00000406659 LINC00482Q8N8I6 264 aa17.93■□□□□ 0.46
DNMT3A-206ENST00000406659 MRPL35Q9NZE8 188 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-206ENST00000406659 AZU1P20160 251 aa17.92■□□□□ 0.46
DNMT3A-206ENST00000406659 DEFB104AQ8WTQ1 72 aa17.92■□□□□ 0.46
DNMT3A-206ENST00000406659 EDA2RQ9HAV5 297 aa17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 C19orf73Q9NVV2 129 aa17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 MRPL16Q9NX20 251 aaKnown RBP17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 HINT1P49773 126 aaPredicted RBP17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 TCTAP57738 103 aa17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 UFSP1Q6NVU6 142 aa17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 WFDC10AQ9H1F0 79 aa17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 TP53TG1Q9Y2A0 90 aa17.91■□□□□ 0.46
DNMT3A-206ENST00000406659 CFAP126Q5VTH2 177 aa17.9■□□□□ 0.46
DNMT3A-206ENST00000406659 HHLA3Q9XRX5 114 aa17.9■□□□□ 0.46
DNMT3A-206ENST00000406659 RPL35AP18077 110 aaKnown RBP17.89■□□□□ 0.45
DNMT3A-206ENST00000406659 COL5A1-AS1Q5SY13 56 aa17.89■□□□□ 0.45
DNMT3A-206ENST00000406659 RHODO00212 210 aa17.89■□□□□ 0.45
DNMT3A-206ENST00000406659 PLNP26678 52 aa17.89■□□□□ 0.45
DNMT3A-206ENST00000406659 RIPPLY3P57055 190 aa17.89■□□□□ 0.45
DNMT3A-206ENST00000406659 NEXN-AS1Q8NBZ9 246 aa17.89■□□□□ 0.45
DNMT3A-206ENST00000406659 I3L3M4 83 aa17.88■□□□□ 0.45
DNMT3A-206ENST00000406659 NMUP48645 174 aa17.88■□□□□ 0.45
DNMT3A-206ENST00000406659 RHOHQ15669 191 aa17.88■□□□□ 0.45
DNMT3A-206ENST00000406659 LURAP1LQ8IV03 231 aa17.88■□□□□ 0.45
DNMT3A-206ENST00000406659 BAALCQ8WXS3 180 aa17.88■□□□□ 0.45
DNMT3A-206ENST00000406659 CHTOPQ9Y3Y2 248 aaKnown RBP17.88■□□□□ 0.45
DNMT3A-206ENST00000406659 NSD1Q96L73 2696 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-206ENST00000406659 F8VRH5 84 aa17.86■□□□□ 0.45
DNMT3A-206ENST00000406659 RS1O15537 224 aa17.86■□□□□ 0.45
DNMT3A-206ENST00000406659 FGF6P10767 208 aa17.86■□□□□ 0.45
DNMT3A-206ENST00000406659 GIG44P09565 113 aaPredicted RBP17.86■□□□□ 0.45
DNMT3A-206ENST00000406659 BOD1L2Q8IYS8 172 aa17.86■□□□□ 0.45
DNMT3A-206ENST00000406659 TNFRSF18Q9Y5U5 241 aa17.86■□□□□ 0.45
DNMT3A-206ENST00000406659 FN1P02751 2386 aaKnown RBP17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 HIVEP1P15822 2718 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 TSHBP01222 138 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 P0DMU3 169 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 FAM231AP0DMU4 169 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 FAM231CP0DMU5 169 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 RPL39P62891 51 aaKnown RBP17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 ZC2HC1BQ5TFG8 222 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 TMEM141Q96I45 108 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 C1QTNF4Q9BXJ3 329 aa17.85■□□□□ 0.45
DNMT3A-206ENST00000406659 GTSCR1Q86UQ5 136 aa17.84■□□□□ 0.45
DNMT3A-206ENST00000406659 RNASE8Q8TDE3 154 aaKnown RBP17.84■□□□□ 0.45
DNMT3A-206ENST00000406659 PRSS29PA6NIE9 313 aa17.84■□□□□ 0.45
DNMT3A-206ENST00000406659 IGIPA6NJ69 53 aa17.84■□□□□ 0.45
DNMT3A-206ENST00000406659 Q6ZSN1 163 aa17.84■□□□□ 0.45
DNMT3A-206ENST00000406659 IL17DQ8TAD2 202 aa17.84■□□□□ 0.45
DNMT3A-206ENST00000406659 TMEM263Q8WUH6 116 aaKnown RBP17.84■□□□□ 0.45
DNMT3A-206ENST00000406659 DLEU1O43261 78 aa17.83■□□□□ 0.44
DNMT3A-206ENST00000406659 C2orf91Q6ZV80 131 aa17.83■□□□□ 0.44
DNMT3A-206ENST00000406659 C2CD3Q4AC94 2353 aa17.83■□□□□ 0.44
DNMT3A-206ENST00000406659 NIPBLQ6KC79 2804 aaeCLIP17.82■□□□□ 0.44
DNMT3A-206ENST00000406659 TRGV1A0A0A0MS02 117 aa17.82■□□□□ 0.44
DNMT3A-206ENST00000406659 MPV17L2Q567V2 206 aa17.82■□□□□ 0.44
DNMT3A-206ENST00000406659 TIMM17AQ99595 171 aa17.82■□□□□ 0.44
DNMT3A-206ENST00000406659 PCP2Q8IVA1 136 aa17.81■□□□□ 0.44
DNMT3A-206ENST00000406659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.81■□□□□ 0.44
DNMT3A-206ENST00000406659 NACAE9PAV3 2078 aa17.81■□□□□ 0.44
DNMT3A-206ENST00000406659 IGHV3-53P01767 116 aa17.81■□□□□ 0.44
DNMT3A-206ENST00000406659 INSL3P51460 131 aa17.81■□□□□ 0.44
DNMT3A-206ENST00000406659 C12orf54Q6X4T0 127 aa17.81■□□□□ 0.44
DNMT3A-206ENST00000406659 IGKV2D-26A0A0A0MRZ7 120 aa17.79■□□□□ 0.44
DNMT3A-206ENST00000406659 C9orf66Q5T8R8 295 aa17.79■□□□□ 0.44
DNMT3A-206ENST00000406659 OR4C5Q8NGB2 326 aa17.79■□□□□ 0.44
DNMT3A-206ENST00000406659 SIVA1O15304 175 aa17.79■□□□□ 0.44
DNMT3A-206ENST00000406659 PMVKQ15126 192 aa17.79■□□□□ 0.44
DNMT3A-206ENST00000406659 C20orf203Q8NBC4 194 aa17.79■□□□□ 0.44
DNMT3A-206ENST00000406659 DNAJC30Q96LL9 226 aa17.79■□□□□ 0.44
DNMT3A-206ENST00000406659 C16orf74Q96GX8 76 aa17.78■□□□□ 0.44
DNMT3A-206ENST00000406659 BVES-AS1Q5T3Y7 98 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 CSNK1G2-AS1Q8NCQ2 148 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 CST9LQ9H4G1 147 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 JMJD1CQ15652 2540 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 TMEM97Q5BJF2 176 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 Q6ZTI0 123 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 CITED1Q99966 193 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 NOP10Q9NPE3 64 aaKnown RBP17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 Q9UF83 564 aa17.76■□□□□ 0.43
DNMT3A-206ENST00000406659 DAZ2Q13117 558 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-206ENST00000406659 RRN3P1Q2M238 152 aa17.74■□□□□ 0.43
DNMT3A-206ENST00000406659 PAPPA-AS1Q5QFB9 102 aa17.74■□□□□ 0.43
DNMT3A-206ENST00000406659 TRAV4A0A0B4J268 109 aa17.73■□□□□ 0.43
DNMT3A-206ENST00000406659 SPATA3Q8NHX4 192 aa17.73■□□□□ 0.43
DNMT3A-206ENST00000406659 ZNF479Q96JC4 524 aa17.72■□□□□ 0.43
DNMT3A-206ENST00000406659 TTTY13Q9BZ97 58 aa17.71■□□□□ 0.43
DNMT3A-206ENST00000406659 TRAV8-6A0A0B4J262 113 aa17.7■□□□□ 0.42
DNMT3A-206ENST00000406659 PLAC8L1A1L4L8 177 aa17.7■□□□□ 0.42
DNMT3A-206ENST00000406659 OPRPNQ99935 248 aaPredicted RBP17.7■□□□□ 0.42
DNMT3A-206ENST00000406659 IGLV4-69A0A075B6H9 119 aa17.69■□□□□ 0.42
DNMT3A-206ENST00000406659 HSD52Q0P140 79 aa17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 PHLDA1Q8WV24 401 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 C11orf86A6NJI1 115 aa17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 ZNF25P17030 456 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 EMP1P54849 157 aa17.68■□□□□ 0.42
DNMT3A-206ENST00000406659 COTL1Q14019 142 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms