RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 WFDC11Q8NEX6 87 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
DUSP28-202ENST00000405954 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
DUSP28-202ENST00000405954 MRAPQ8TCY5 172 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 JPT2Q9H910 190 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
DUSP28-202ENST00000405954 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
DUSP28-202ENST00000405954 SORL1Q92673 2214 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 LHBP01229 141 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 CNFNQ9BYD5 112 aa10.66□□□□□ -0.7
DUSP28-202ENST00000405954 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
DUSP28-202ENST00000405954 HOXD3P31249 432 aaPredicted RBP10.65□□□□□ -0.7
DUSP28-202ENST00000405954 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
DUSP28-202ENST00000405954 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
DUSP28-202ENST00000405954 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.7
DUSP28-202ENST00000405954 CLEC19AQ6UXS0 136 aa10.64□□□□□ -0.71
DUSP28-202ENST00000405954 TMEM243Q9BU79 118 aa10.64□□□□□ -0.71
DUSP28-202ENST00000405954 GNRH2O43555 120 aa10.64□□□□□ -0.71
DUSP28-202ENST00000405954 DPH3Q96FX2 82 aa10.64□□□□□ -0.71
DUSP28-202ENST00000405954 SLC25A15Q9Y619 301 aa10.64□□□□□ -0.71
DUSP28-202ENST00000405954 NBR2O15453 112 aa10.64□□□□□ -0.71
DUSP28-202ENST00000405954 RNASE1P07998 156 aaKnown RBP10.64□□□□□ -0.71
DUSP28-202ENST00000405954 LY6DQ14210 128 aa10.64□□□□□ -0.71
DUSP28-202ENST00000405954 C17orf100A8MU93 164 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 LST1O00453 97 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 BRK1Q8WUW1 75 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 RAI1Q7Z5J4 1906 aaPredicted RBP10.63□□□□□ -0.71
DUSP28-202ENST00000405954 IGLV4-69A0A075B6H9 119 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 A0A087WVE0 104 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 IGKV3-20P01619 116 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 ZNF580Q9UK33 172 aa10.63□□□□□ -0.71
DUSP28-202ENST00000405954 PRRC2AP48634 2157 aaKnown RBP10.63□□□□□ -0.71
DUSP28-202ENST00000405954 A0A0G2JNJ9 132 aa10.62□□□□□ -0.71
DUSP28-202ENST00000405954 LINC01546A6NGU7 62 aa10.62□□□□□ -0.71
DUSP28-202ENST00000405954 CD59P13987 128 aa10.62□□□□□ -0.71
DUSP28-202ENST00000405954 LOXP28300 417 aaPredicted RBP10.62□□□□□ -0.71
DUSP28-202ENST00000405954 PFN2P35080 140 aa10.62□□□□□ -0.71
DUSP28-202ENST00000405954 Q9UFV3 132 aa10.62□□□□□ -0.71
DUSP28-202ENST00000405954 J3QLI3 93 aa10.62□□□□□ -0.71
DUSP28-202ENST00000405954 NXPH4O95158 308 aa10.62□□□□□ -0.71
DUSP28-202ENST00000405954 TMEM223A0PJW6 202 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 DEFB109BQ30KR1 87 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 ZNF876PQ49A33 203 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 TINCRA0A1B0GVN0 87 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
DUSP28-202ENST00000405954 EBI3Q14213 229 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 IGHV7-4-1A0A0J9YVY3 117 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 CRYGDP07320 174 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 UCNP55089 124 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 DEFB1P60022 68 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 Q9HAA7 133 aa10.61□□□□□ -0.71
DUSP28-202ENST00000405954 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
DUSP28-202ENST00000405954 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 C20orf197Q8N268 126 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 PRSS33Q8NF86 280 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 WIPF1O43516 503 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 SERP2Q8N6R1 65 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 FAM27E3Q08E93 113 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 POM121L12Q8N7R1 296 aa10.6□□□□□ -0.71
DUSP28-202ENST00000405954 IGF1P05019 195 aa10.59□□□□□ -0.71
DUSP28-202ENST00000405954 A8MZ25 164 aa10.59□□□□□ -0.71
DUSP28-202ENST00000405954 CRYGAP11844 174 aa10.59□□□□□ -0.71
DUSP28-202ENST00000405954 MSRB2Q9Y3D2 182 aa10.59□□□□□ -0.71
DUSP28-202ENST00000405954 PYGO1Q9Y3Y4 419 aa10.59□□□□□ -0.71
DUSP28-202ENST00000405954 V9GYY9 64 aa10.58□□□□□ -0.72
DUSP28-202ENST00000405954 COL27A1Q8IZC6 1860 aaPredicted RBP10.58□□□□□ -0.72
DUSP28-202ENST00000405954 TRBV7-1A0A0A6YYK4 115 aa10.58□□□□□ -0.72
DUSP28-202ENST00000405954 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
DUSP28-202ENST00000405954 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
DUSP28-202ENST00000405954 LYNX1G3V0Z9 82 aa10.58□□□□□ -0.72
DUSP28-202ENST00000405954 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
DUSP28-202ENST00000405954 RBMY1A1P0DJD3 496 aaKnown RBP10.58□□□□□ -0.72
DUSP28-202ENST00000405954 RBMY1CP0DJD4 496 aa10.58□□□□□ -0.72
DUSP28-202ENST00000405954 LYNX1P0DP58 116 aa10.58□□□□□ -0.72
DUSP28-202ENST00000405954 RBMY1FQ15415 496 aaKnown RBP10.58□□□□□ -0.72
DUSP28-202ENST00000405954 MBD3L2Q8NHZ7 208 aaPredicted RBP10.58□□□□□ -0.72
DUSP28-202ENST00000405954 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
DUSP28-202ENST00000405954 VPS13CQ709C8 3753 aa10.58□□□□□ -0.72
DUSP28-202ENST00000405954 IGLV1-44P01699 117 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 TIRAPP58753 221 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 TIMM17AQ99595 171 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 GATA4P43694 442 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 USP17L23D6RBM5 183 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 LY6G5BQ8NDX9 201 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 SMCR5Q8TEV8 140 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 ACACBO00763 2458 aa10.57□□□□□ -0.72
DUSP28-202ENST00000405954 ZFYVE26Q68DK2 2539 aa10.56□□□□□ -0.72
DUSP28-202ENST00000405954 TRAV23DV6A0A075B6W5 121 aa10.56□□□□□ -0.72
DUSP28-202ENST00000405954 SUMO4Q6EEV6 95 aa10.56□□□□□ -0.72
DUSP28-202ENST00000405954 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
DUSP28-202ENST00000405954 CTSGP08311 255 aa10.56□□□□□ -0.72
DUSP28-202ENST00000405954 RBM3P98179 157 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms