RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 NDUFA11Q86Y39 141 aa10.26□□□□□ -0.77
SNED1-205ENST00000405547 COX7B2Q8TF08 81 aa10.26□□□□□ -0.77
SNED1-205ENST00000405547 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
SNED1-205ENST00000405547 BLCAPP62952 87 aa10.26□□□□□ -0.77
SNED1-205ENST00000405547 SEM1Q6ZVN7 128 aa10.26□□□□□ -0.77
SNED1-205ENST00000405547 FANCD2OSQ96PS1 177 aa10.26□□□□□ -0.77
SNED1-205ENST00000405547 TRAV4A0A0B4J268 109 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 GDF5OSQ5U4N7 250 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
SNED1-205ENST00000405547 EIF4EBP1Q13541 118 aaPredicted RBP10.25□□□□□ -0.77
SNED1-205ENST00000405547 IGHV1-58A0A0C4DH39 117 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 RS1O15537 224 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 A0A1B0GX51 115 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 JMJD7-PLA2G4BH0Y9G9 81 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 ATP5G1P05496 136 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 CGB3P0DN86 165 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 CGB7P0DN87 165 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 LINC00322Q6ZN03 302 aaPredicted RBP10.25□□□□□ -0.77
SNED1-205ENST00000405547 PIEZO1Q92508 2521 aa10.25□□□□□ -0.77
SNED1-205ENST00000405547 BRWD1-AS2P59051 145 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 FN1P02751 2386 aaKnown RBP10.24□□□□□ -0.77
SNED1-205ENST00000405547 HIST2H2BCQ6DN03 193 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 NBL1P41271 181 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 Q71RC1 249 aaPredicted RBP10.24□□□□□ -0.77
SNED1-205ENST00000405547 SPRY4Q9C004 299 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 FUSP35637 526 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNED1-205ENST00000405547 DEFB136Q30KP8 78 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 GOLGB1Q14789 3259 aaKnown RBP10.24□□□□□ -0.77
SNED1-205ENST00000405547 MBD6Q96DN6 1003 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 COX7A2LO14548 114 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 SMIM20Q8N5G0 67 aa10.24□□□□□ -0.77
SNED1-205ENST00000405547 MRAPQ8TCY5 172 aa10.23□□□□□ -0.77
SNED1-205ENST00000405547 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
SNED1-205ENST00000405547 SETD2Q9BYW2 2564 aaPredicted RBP10.23□□□□□ -0.77
SNED1-205ENST00000405547 IGHV4-38-2P0DP08 117 aa10.23□□□□□ -0.77
SNED1-205ENST00000405547 SLURP1P55000 103 aa10.23□□□□□ -0.77
SNED1-205ENST00000405547 A0A096LPF7 62 aa10.23□□□□□ -0.77
SNED1-205ENST00000405547 PROP1O75360 226 aa10.23□□□□□ -0.77
SNED1-205ENST00000405547 APRG1Q8IVJ8 170 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 Q8N7P7 452 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 IGHV4-61A0A0C4DH41 118 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 TMEM89A2RUT3 159 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 IGHG2P01859 326 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 MDFICQ9P1T7 246 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 NAV2Q8IVL1 2488 aa10.22□□□□□ -0.77
SNED1-205ENST00000405547 GYPEP15421 78 aa10.21□□□□□ -0.77
SNED1-205ENST00000405547 IGHV3-30-3P0DP02 117 aa10.21□□□□□ -0.77
SNED1-205ENST00000405547 J3KT08 172 aa10.21□□□□□ -0.78
SNED1-205ENST00000405547 TMEM256-PLSCR3K7ERE1 68 aa10.21□□□□□ -0.78
SNED1-205ENST00000405547 DAND5Q8N907 189 aa10.21□□□□□ -0.78
SNED1-205ENST00000405547 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.78
SNED1-205ENST00000405547 IGF2RP11717 2491 aa10.21□□□□□ -0.78
SNED1-205ENST00000405547 MSMPQ1L6U9 139 aa10.2□□□□□ -0.78
SNED1-205ENST00000405547 TCL1BO95988 128 aa10.2□□□□□ -0.78
SNED1-205ENST00000405547 LOXL1Q08397 574 aaPredicted RBP10.2□□□□□ -0.78
SNED1-205ENST00000405547 MIAQ16674 131 aa10.2□□□□□ -0.78
SNED1-205ENST00000405547 IGKV3D-7A0A0C4DH55 119 aa10.2□□□□□ -0.78
SNED1-205ENST00000405547 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
SNED1-205ENST00000405547 CXCL5P42830 114 aa10.2□□□□□ -0.78
SNED1-205ENST00000405547 Q6ZUT4 128 aa10.2□□□□□ -0.78
SNED1-205ENST00000405547 LRRK2Q5S007 2527 aa10.19□□□□□ -0.78
SNED1-205ENST00000405547 FBXL19-AS1Q494R0 122 aa10.19□□□□□ -0.78
SNED1-205ENST00000405547 MRPL23Q16540 153 aaKnown RBP10.19□□□□□ -0.78
SNED1-205ENST00000405547 CLEC2BQ92478 149 aa10.19□□□□□ -0.78
SNED1-205ENST00000405547 Q6ZQT7 251 aa10.19□□□□□ -0.78
SNED1-205ENST00000405547 PSMB8P28062 276 aa10.19□□□□□ -0.78
SNED1-205ENST00000405547 ZNF80P51504 273 aaPredicted RBP10.19□□□□□ -0.78
SNED1-205ENST00000405547 LINC00643Q86TS7 51 aa10.19□□□□□ -0.78
SNED1-205ENST00000405547 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 TP53TG3Q9ULZ0 132 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 TMEM61Q8N0U2 210 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 TRAV26-1A0A087WT03 109 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 IGHV4OR15-8A0A075B7B6 117 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 A0A087WW49 117 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 A0A0J9YX75 114 aa10.18□□□□□ -0.78
SNED1-205ENST00000405547 IGHV4-30-2A0A087WSY4 118 aa10.17□□□□□ -0.78
SNED1-205ENST00000405547 ZFP36P26651 326 aaKnown RBP10.17□□□□□ -0.78
SNED1-205ENST00000405547 HHLA3Q9XRX5 114 aa10.17□□□□□ -0.78
SNED1-205ENST00000405547 USP9XQ93008 2570 aaPredicted RBP10.17□□□□□ -0.78
SNED1-205ENST00000405547 U3KQK5 164 aa10.17□□□□□ -0.78
SNED1-205ENST00000405547 UNQ9165/PRO28630Q6UXU0 137 aa10.17□□□□□ -0.78
SNED1-205ENST00000405547 A0A0J9YY99 117 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 PTH2Q96A98 100 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 PDE6GP18545 87 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 FSTL3O95633 263 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 DEFB105AQ8NG35 78 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 LECT2O14960 151 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 C10orf105Q8TEF2 133 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 TMEM263Q8WUH6 116 aaKnown RBP10.16□□□□□ -0.78
SNED1-205ENST00000405547 SPANXB1Q9NS25 103 aaPredicted RBP10.16□□□□□ -0.78
SNED1-205ENST00000405547 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 SIRPDQ9H106 197 aa10.16□□□□□ -0.78
SNED1-205ENST00000405547 A0A1W2PNU3 283 aaPredicted RBP10.15□□□□□ -0.78
SNED1-205ENST00000405547 NDUFV3P56181 108 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms