RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 LYRM9A8MSI8 78 aa8.96□□□□□ -0.98
RAPGEF3-204ENST00000405493 ZNF702PQ9H963 129 aa8.96□□□□□ -0.98
RAPGEF3-204ENST00000405493 NUP210LQ5VU65 1888 aa8.96□□□□□ -0.98
RAPGEF3-204ENST00000405493 MRPL36Q9P0J6 103 aaKnown RBP8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 DYSFO75923 2080 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 B5MCH6 92 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 HHLA3Q9XRX5 114 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 LY6LH3BQJ8 138 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 CFC1P0CG37 223 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 CDSNQ15517 529 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 C9orf47Q6ZRZ4 202 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 CTRLP40313 264 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 C15orf53Q8NAA6 179 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 PRO0255Q9UI72 69 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 TRAV13-2A0A0B4J235 113 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 MIFP14174 115 aa8.95□□□□□ -0.98
RAPGEF3-204ENST00000405493 SPATA12Q7Z6I5 190 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 TMEM126AQ9H061 195 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 TP53TG3Q9ULZ0 132 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 A0A0J9YX75 114 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 A0A1B0GXF2 115 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 EML6Q6ZMW3 1958 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 UBE2BP63146 152 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 ZNF503Q96F45 646 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 CARD19Q96LW7 228 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 IGLV2-8P01709 118 aa8.94□□□□□ -0.98
RAPGEF3-204ENST00000405493 C19orf71A6NCJ1 209 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 UTF1Q5T230 341 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 ODF3Q96PU9 254 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 Q9H8V8 135 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 DEFB1P60022 68 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 RBX1P62877 108 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 LRP4O75096 1905 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 MED14OSP0DP75 135 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 SS18L2Q9UHA2 77 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 TRBV12-3P01733 135 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 TEN1Q86WV5 123 aa8.93□□□□□ -0.98
RAPGEF3-204ENST00000405493 Q8N1Y9 231 aa8.92□□□□□ -0.98
RAPGEF3-204ENST00000405493 ZFP2Q6ZN57 461 aa8.92□□□□□ -0.98
RAPGEF3-204ENST00000405493 UNQ9165/PRO28630Q6UXU0 137 aa8.92□□□□□ -0.98
RAPGEF3-204ENST00000405493 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
RAPGEF3-204ENST00000405493 BRWD1-AS2P59051 145 aa8.92□□□□□ -0.98
RAPGEF3-204ENST00000405493 CCDC140Q96MF4 163 aa8.92□□□□□ -0.98
RAPGEF3-204ENST00000405493 GDF5OSQ5U4N7 250 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 C5orf38Q86SI9 138 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 TNRC6AQ8NDV7 1962 aaKnown RBP8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 FOXI1Q12951 378 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 FREM1Q5H8C1 2179 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 HIVEP3Q5T1R4 2406 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 TRAV10A0A0B4J240 114 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 ESM1Q9NQ30 184 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 CHD8Q9HCK8 2581 aa8.91□□□□□ -0.98
RAPGEF3-204ENST00000405493 TRBV6-1A0A0K0K1D8 114 aa8.9□□□□□ -0.98
RAPGEF3-204ENST00000405493 KIR2DL5BQ8NHK3 375 aa8.9□□□□□ -0.98
RAPGEF3-204ENST00000405493 ODF1Q14990 250 aa8.9□□□□□ -0.98
RAPGEF3-204ENST00000405493 MED12LQ86YW9 2145 aa8.9□□□□□ -0.98
RAPGEF3-204ENST00000405493 RBMY1FQ15415 496 aaKnown RBP8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 IGLV10-54A0A075B6I4 117 aa8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 IGHV3-30P01768 117 aa8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 IGHV3-33P01772 117 aa8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 IGHV3-30-3P0DP02 117 aa8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 IGHV3-30-5P0DP03 117 aa8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 PSMB8P28062 276 aa8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 RPL32P62910 135 aaKnown RBP8.9□□□□□ -0.99
RAPGEF3-204ENST00000405493 DEFB131BA0A096LNP1 70 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 K7EQG2 157 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 PROP1O75360 226 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 DSCR8Q96T75 97 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 TRBV10-1A0A0K0K1A3 114 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 LINC01548A6NM66 108 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 SMR3AQ99954 134 aa8.89□□□□□ -0.99
RAPGEF3-204ENST00000405493 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 RPL39P62891 51 aaKnown RBP8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 C16orf95Q9H693 158 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 CRYBA4P53673 196 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 RPL18AQ02543 176 aaKnown RBP8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 CITED1Q99966 193 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 TLN1Q9Y490 2541 aaKnown RBP8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 TRBV7-3A0A075B6L6 115 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 HAMPP81172 84 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 CAMK2N2Q96S95 79 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 IGKV1D-37A0A075B6S9 117 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 DEFB4AO15263 64 aa8.88□□□□□ -0.99
RAPGEF3-204ENST00000405493 A0A0J9YXV3 536 aa8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 HERV-K104P63124 156 aa8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 Q8N6K4 173 aa8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 UBL5Q9BZL1 73 aa8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 CRYGBP07316 175 aa8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 LINC00322Q6ZN03 302 aaPredicted RBP8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 TP73-AS1Q9UF72 201 aa8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 PRRC2AP48634 2157 aaKnown RBP8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 TRAV26-1A0A087WT03 109 aa8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 C1orf229Q6ZS94 237 aaPredicted RBP8.87□□□□□ -0.99
RAPGEF3-204ENST00000405493 DEFB105AQ8NG35 78 aa8.86□□□□□ -0.99
RAPGEF3-204ENST00000405493 A4D1N5 150 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms