RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 IGHV3-38A0A0C4DH36 116 aa11.75□□□□□ -0.53
PTCHD3P3-201ENST00000403073 SIVA1O15304 175 aa11.75□□□□□ -0.53
PTCHD3P3-201ENST00000403073 CAMPP49913 170 aa11.75□□□□□ -0.53
PTCHD3P3-201ENST00000403073 MRPL54Q6P161 138 aaKnown RBP11.75□□□□□ -0.53
PTCHD3P3-201ENST00000403073 GATD1Q8NB37 220 aa11.75□□□□□ -0.53
PTCHD3P3-201ENST00000403073 CARHSP1Q9Y2V2 147 aaKnown RBP11.75□□□□□ -0.53
PTCHD3P3-201ENST00000403073 TNFRSF18Q9Y5U5 241 aa11.75□□□□□ -0.53
PTCHD3P3-201ENST00000403073 NBDYA0A0U1RRE5 68 aa11.74□□□□□ -0.53
PTCHD3P3-201ENST00000403073 OR10J3Q5JRS4 329 aa11.74□□□□□ -0.53
PTCHD3P3-201ENST00000403073 LELP1Q5T871 98 aa11.74□□□□□ -0.53
PTCHD3P3-201ENST00000403073 Q6ZR54 194 aa11.74□□□□□ -0.53
PTCHD3P3-201ENST00000403073 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
PTCHD3P3-201ENST00000403073 DNAJC30Q96LL9 226 aa11.74□□□□□ -0.53
PTCHD3P3-201ENST00000403073 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
PTCHD3P3-201ENST00000403073 RAB4AP20338 218 aa11.73□□□□□ -0.53
PTCHD3P3-201ENST00000403073 AMN1Q8IY45 258 aa11.73□□□□□ -0.53
PTCHD3P3-201ENST00000403073 NIT2Q9NQR4 276 aa11.73□□□□□ -0.53
PTCHD3P3-201ENST00000403073 GAS8-AS1O95177 125 aa11.72□□□□□ -0.53
PTCHD3P3-201ENST00000403073 SLC7A5P1Q8MH63 180 aa11.72□□□□□ -0.53
PTCHD3P3-201ENST00000403073 CTDSP1Q9GZU7 261 aa11.72□□□□□ -0.53
PTCHD3P3-201ENST00000403073 KMT2AQ03164 3969 aa11.71□□□□□ -0.53
PTCHD3P3-201ENST00000403073 A0A1B0GW15 77 aa11.71□□□□□ -0.53
PTCHD3P3-201ENST00000403073 A0A1B0GXF2 115 aa11.71□□□□□ -0.53
PTCHD3P3-201ENST00000403073 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.53
PTCHD3P3-201ENST00000403073 CLRN3Q8NCR9 226 aa11.71□□□□□ -0.53
PTCHD3P3-201ENST00000403073 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
PTCHD3P3-201ENST00000403073 KRTAP1-5Q9BYS1 174 aa11.71□□□□□ -0.53
PTCHD3P3-201ENST00000403073 A0A087WWC5 75 aa11.7□□□□□ -0.54
PTCHD3P3-201ENST00000403073 APOC3P02656 99 aa11.7□□□□□ -0.54
PTCHD3P3-201ENST00000403073 HBBP68871 147 aa11.7□□□□□ -0.54
PTCHD3P3-201ENST00000403073 DAZ4Q86SG3 579 aaKnown RBP11.7□□□□□ -0.54
PTCHD3P3-201ENST00000403073 DAZ3Q9NR90 486 aaKnown RBP11.7□□□□□ -0.54
PTCHD3P3-201ENST00000403073 DNAH6Q9C0G6 4158 aa11.7□□□□□ -0.54
PTCHD3P3-201ENST00000403073 S100A8P05109 93 aa11.69□□□□□ -0.54
PTCHD3P3-201ENST00000403073 FAM104BQ5XKR9 115 aa11.69□□□□□ -0.54
PTCHD3P3-201ENST00000403073 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.69□□□□□ -0.54
PTCHD3P3-201ENST00000403073 DEFB104AQ8WTQ1 72 aa11.69□□□□□ -0.54
PTCHD3P3-201ENST00000403073 IMMP2LQ96T52 175 aa11.69□□□□□ -0.54
PTCHD3P3-201ENST00000403073 RPS10P5Q9NQ39 176 aa11.69□□□□□ -0.54
PTCHD3P3-201ENST00000403073 SMKR1H3BMG3 65 aa11.68□□□□□ -0.54
PTCHD3P3-201ENST00000403073 DNAH10OSP0CZ25 163 aa11.68□□□□□ -0.54
PTCHD3P3-201ENST00000403073 MRPL51Q4U2R6 128 aaKnown RBP11.68□□□□□ -0.54
PTCHD3P3-201ENST00000403073 NTM-AS1Q6ZSK4 140 aa11.68□□□□□ -0.54
PTCHD3P3-201ENST00000403073 ATP5L2Q7Z4Y8 100 aa11.68□□□□□ -0.54
PTCHD3P3-201ENST00000403073 FRZBQ92765 325 aa11.68□□□□□ -0.54
PTCHD3P3-201ENST00000403073 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
PTCHD3P3-201ENST00000403073 TRBV6-8A0A0A6YYG3 113 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 NCR2O95944 276 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 IGHV3-30P01768 117 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 IGHV3-33P01772 117 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 IGHV3-30-5P0DP03 117 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 RPS10P46783 165 aaKnown RBP11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 TTC32Q5I0X7 151 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 Q8N3U1 123 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 BTF3L4Q96K17 158 aa11.67□□□□□ -0.54
PTCHD3P3-201ENST00000403073 RHEBQ15382 184 aa11.66□□□□□ -0.54
PTCHD3P3-201ENST00000403073 NDUFA5Q16718 116 aa11.66□□□□□ -0.54
PTCHD3P3-201ENST00000403073 C1orf134Q5TEV5 83 aa11.66□□□□□ -0.54
PTCHD3P3-201ENST00000403073 KCNIP4Q6PIL6 250 aa11.66□□□□□ -0.54
PTCHD3P3-201ENST00000403073 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
PTCHD3P3-201ENST00000403073 TRAV9-2A0A087WT02 112 aa11.65□□□□□ -0.54
PTCHD3P3-201ENST00000403073 LINC01556Q5JQF7 62 aa11.65□□□□□ -0.54
PTCHD3P3-201ENST00000403073 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.54
PTCHD3P3-201ENST00000403073 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
PTCHD3P3-201ENST00000403073 RTL8CO15255 209 aa11.64□□□□□ -0.55
PTCHD3P3-201ENST00000403073 TMEM97Q5BJF2 176 aa11.64□□□□□ -0.55
PTCHD3P3-201ENST00000403073 SVBPQ8N300 66 aa11.64□□□□□ -0.55
PTCHD3P3-201ENST00000403073 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
PTCHD3P3-201ENST00000403073 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
PTCHD3P3-201ENST00000403073 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
PTCHD3P3-201ENST00000403073 SNAPINO95295 136 aa11.63□□□□□ -0.55
PTCHD3P3-201ENST00000403073 S100PP25815 95 aa11.63□□□□□ -0.55
PTCHD3P3-201ENST00000403073 CKS2P33552 79 aa11.63□□□□□ -0.55
PTCHD3P3-201ENST00000403073 NIT1Q86X76 327 aa11.63□□□□□ -0.55
PTCHD3P3-201ENST00000403073 NRACQ8N912 160 aa11.63□□□□□ -0.55
PTCHD3P3-201ENST00000403073 CHCHD5Q9BSY4 110 aa11.63□□□□□ -0.55
PTCHD3P3-201ENST00000403073 TMEM262E9PQX1 116 aa11.62□□□□□ -0.55
PTCHD3P3-201ENST00000403073 DNAH2Q9P225 4427 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 TRBV25-1A0A075B6N4 114 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 TRAV9-1A0A075B6T8 112 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 D6R8Y8 96 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 K7EP13 123 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 PMCHP20382 165 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 COTL1Q14019 142 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 TMEM70Q9BUB7 260 aa11.61□□□□□ -0.55
PTCHD3P3-201ENST00000403073 DNAH10Q8IVF4 4471 aa11.6□□□□□ -0.55
PTCHD3P3-201ENST00000403073 I3L3M4 83 aa11.6□□□□□ -0.55
PTCHD3P3-201ENST00000403073 PPP1R17O96001 155 aa11.6□□□□□ -0.55
PTCHD3P3-201ENST00000403073 POLR2KP53803 58 aaKnown RBP11.6□□□□□ -0.55
PTCHD3P3-201ENST00000403073 GAGE6Q13070 117 aa11.6□□□□□ -0.55
PTCHD3P3-201ENST00000403073 C10orf126Q8N4M7 172 aa11.6□□□□□ -0.55
PTCHD3P3-201ENST00000403073 A0A087WX48 190 aa11.59□□□□□ -0.55
PTCHD3P3-201ENST00000403073 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
PTCHD3P3-201ENST00000403073 TNFRSF6BO95407 300 aa11.59□□□□□ -0.55
PTCHD3P3-201ENST00000403073 AMTP48728 403 aa11.59□□□□□ -0.55
PTCHD3P3-201ENST00000403073 ATRAIDQ6UW56 229 aa11.59□□□□□ -0.55
PTCHD3P3-201ENST00000403073 TMEM136Q6ZRR5 245 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms