RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 IGHG2P01859 326 aa10.57□□□□□ -0.72
ATG3-202ENST00000402314 PRB1P04280 392 aa10.57□□□□□ -0.72
ATG3-202ENST00000402314 MSMBP08118 114 aa10.57□□□□□ -0.72
ATG3-202ENST00000402314 RHPN1-AS1Q9BWJ2 59 aa10.57□□□□□ -0.72
ATG3-202ENST00000402314 A4D1N5 150 aa10.56□□□□□ -0.72
ATG3-202ENST00000402314 A6NDX4 124 aa10.56□□□□□ -0.72
ATG3-202ENST00000402314 TSHBP01222 138 aa10.56□□□□□ -0.72
ATG3-202ENST00000402314 COX6B1P14854 86 aa10.56□□□□□ -0.72
ATG3-202ENST00000402314 SRSF2Q01130 221 aaKnown RBP10.56□□□□□ -0.72
ATG3-202ENST00000402314 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
ATG3-202ENST00000402314 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 C9orf139Q6ZV77 190 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 NF1P21359 2839 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
ATG3-202ENST00000402314 GAGE5Q13069 117 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 GAGE6Q13070 117 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 SMIM20Q8N5G0 67 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 NDUFA4O00483 81 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 SOCS3O14543 225 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 IGKV3-20P01619 116 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 GAGE2BQ13066 116 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 GAGE2EQ4V326 116 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 GAGE2DQ9UEU5 116 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 PRO1854Q9UHT4 67 aa10.55□□□□□ -0.72
ATG3-202ENST00000402314 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
ATG3-202ENST00000402314 ZNRF2Q8NHG8 242 aa10.54□□□□□ -0.72
ATG3-202ENST00000402314 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
ATG3-202ENST00000402314 SNCGO76070 127 aa10.54□□□□□ -0.72
ATG3-202ENST00000402314 IGHV3-30P01768 117 aa10.54□□□□□ -0.72
ATG3-202ENST00000402314 IGHV3-30-5P0DP03 117 aa10.54□□□□□ -0.72
ATG3-202ENST00000402314 DPH3P1Q9H4G8 78 aa10.54□□□□□ -0.72
ATG3-202ENST00000402314 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
ATG3-202ENST00000402314 PRSS2P07478 247 aa10.53□□□□□ -0.72
ATG3-202ENST00000402314 Q6ZSV7 163 aa10.53□□□□□ -0.72
ATG3-202ENST00000402314 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
ATG3-202ENST00000402314 EIF4EBP3O60516 100 aaPredicted RBP10.53□□□□□ -0.72
ATG3-202ENST00000402314 TTC32Q5I0X7 151 aa10.52□□□□□ -0.72
ATG3-202ENST00000402314 HIST2H2BDQ6DRA6 164 aa10.52□□□□□ -0.72
ATG3-202ENST00000402314 DUX5Q96PT3 197 aa10.52□□□□□ -0.72
ATG3-202ENST00000402314 ASIPP42127 132 aa10.52□□□□□ -0.73
ATG3-202ENST00000402314 DEFB112Q30KQ8 113 aa10.52□□□□□ -0.73
ATG3-202ENST00000402314 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.73
ATG3-202ENST00000402314 WNK1Q9H4A3 2382 aa10.52□□□□□ -0.73
ATG3-202ENST00000402314 LGALS3P17931 250 aaKnown RBP10.52□□□□□ -0.73
ATG3-202ENST00000402314 HERVK_113P61574 105 aa10.52□□□□□ -0.73
ATG3-202ENST00000402314 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
ATG3-202ENST00000402314 J3QQQ9 107 aa10.51□□□□□ -0.73
ATG3-202ENST00000402314 HERV-K104P63124 156 aa10.51□□□□□ -0.73
ATG3-202ENST00000402314 RNASE13Q5GAN3 156 aaKnown RBP10.51□□□□□ -0.73
ATG3-202ENST00000402314 MUSTN1Q8IVN3 82 aa10.51□□□□□ -0.73
ATG3-202ENST00000402314 Q8N1Y9 231 aa10.51□□□□□ -0.73
ATG3-202ENST00000402314 USMG5Q96IX5 58 aa10.5□□□□□ -0.73
ATG3-202ENST00000402314 PRRC2AP48634 2157 aaKnown RBP10.5□□□□□ -0.73
ATG3-202ENST00000402314 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
ATG3-202ENST00000402314 NDUFV3P56181 108 aaKnown RBP10.5□□□□□ -0.73
ATG3-202ENST00000402314 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
ATG3-202ENST00000402314 ZNF469Q96JG9 3925 aaPredicted RBP10.5□□□□□ -0.73
ATG3-202ENST00000402314 IGLV1-40P01703 118 aa10.5□□□□□ -0.73
ATG3-202ENST00000402314 FAM159AQ6UWV7 190 aa10.5□□□□□ -0.73
ATG3-202ENST00000402314 DAZ1Q9NQZ3 744 aaKnown RBP10.5□□□□□ -0.73
ATG3-202ENST00000402314 RNASE3P12724 160 aaKnown RBP10.49□□□□□ -0.73
ATG3-202ENST00000402314 PMVKQ15126 192 aa10.49□□□□□ -0.73
ATG3-202ENST00000402314 TRAV12-2A0A075B6T6 113 aa10.49□□□□□ -0.73
ATG3-202ENST00000402314 OVOL1O14753 267 aa10.49□□□□□ -0.73
ATG3-202ENST00000402314 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
ATG3-202ENST00000402314 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
ATG3-202ENST00000402314 TRAV12-3A0A0B4J271 114 aa10.48□□□□□ -0.73
ATG3-202ENST00000402314 B4DSR2 109 aa10.48□□□□□ -0.73
ATG3-202ENST00000402314 LINC01619G3V211 115 aa10.48□□□□□ -0.73
ATG3-202ENST00000402314 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
ATG3-202ENST00000402314 CHD6Q8TD26 2715 aa10.48□□□□□ -0.73
ATG3-202ENST00000402314 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 A8MZ25 164 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 IGHV4-4A0A075B6R2 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 DUX3Q96PT4 197 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 CITED1Q99966 193 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 SPXQ9BT56 116 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 GAGE7O76087 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 IGHV3-33P01772 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 HTN1P15515 57 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 CFHR3Q02985 330 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 GAGE4Q13068 117 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 SUMO4Q6EEV6 95 aa10.47□□□□□ -0.73
ATG3-202ENST00000402314 IGIPA6NJ69 53 aa10.46□□□□□ -0.73
ATG3-202ENST00000402314 ACANP16112 2415 aa10.46□□□□□ -0.74
ATG3-202ENST00000402314 A0A0J9YXV3 536 aa10.46□□□□□ -0.74
ATG3-202ENST00000402314 TMEM262E9PQX1 116 aa10.46□□□□□ -0.74
ATG3-202ENST00000402314 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.74
ATG3-202ENST00000402314 RHODO00212 210 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 IFITM1P13164 125 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 DCANP1Q8TF63 244 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 VCX2Q9H322 139 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms