RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 CREBBPQ92793 2442 aa12.69□□□□□ -0.38
TSC2-204ENST00000401874 U3KQK5 164 aa12.69□□□□□ -0.38
TSC2-204ENST00000401874 FAM236AA0A1B0GUQ0 79 aa12.69□□□□□ -0.38
TSC2-204ENST00000401874 FAM236BA0A1B0GV22 79 aa12.69□□□□□ -0.38
TSC2-204ENST00000401874 JMJD7-PLA2G4BH0Y9G9 81 aa12.69□□□□□ -0.38
TSC2-204ENST00000401874 TRBV10-1A0A0K0K1A3 114 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 hADV29S1A0JD25 119 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 MIAQ16674 131 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 NEXN-AS1Q8NBZ9 246 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 TM2D2Q9BX73 214 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 PCNX2A6NKB5 2137 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 TMEM258P61165 79 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 HHLA3Q9XRX5 114 aa12.68□□□□□ -0.38
TSC2-204ENST00000401874 NFE4Q86UQ8 179 aa12.67□□□□□ -0.38
TSC2-204ENST00000401874 IGLV10-54A0A075B6I4 117 aa12.67□□□□□ -0.38
TSC2-204ENST00000401874 FUSP35637 526 aaKnown RBP eCLIP12.67□□□□□ -0.38
TSC2-204ENST00000401874 TCL1BO95988 128 aa12.67□□□□□ -0.38
TSC2-204ENST00000401874 TMEM263Q8WUH6 116 aaKnown RBP12.67□□□□□ -0.38
TSC2-204ENST00000401874 EP400Q96L91 3159 aa12.66□□□□□ -0.38
TSC2-204ENST00000401874 RBM3P98179 157 aaKnown RBP12.66□□□□□ -0.38
TSC2-204ENST00000401874 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
TSC2-204ENST00000401874 TNFRSF13BO14836 293 aaPredicted RBP12.66□□□□□ -0.38
TSC2-204ENST00000401874 IGF1P05019 195 aa12.66□□□□□ -0.38
TSC2-204ENST00000401874 LMO4P61968 165 aa12.66□□□□□ -0.38
TSC2-204ENST00000401874 IGKV3D-7A0A0C4DH55 119 aa12.66□□□□□ -0.38
TSC2-204ENST00000401874 LY6LH3BQJ8 138 aa12.66□□□□□ -0.38
TSC2-204ENST00000401874 A0A1B0GX51 115 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 LECT2O14960 151 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 NUP210LQ5VU65 1888 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 EBI3Q14213 229 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 A0A0J9YXY3 114 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 TMEM61Q8N0U2 210 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 MIR7-3HGQ8N6C7 128 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 DEFB105AQ8NG35 78 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.388e-7■■■□□ 15.7
TSC2-204ENST00000401874 MUC22E2RYF6 1773 aaPredicted RBP12.65□□□□□ -0.38
TSC2-204ENST00000401874 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 ETDCA0A1B0GVM5 59 aa12.65□□□□□ -0.38
TSC2-204ENST00000401874 DYSFO75923 2080 aa12.65□□□□□ -0.39
TSC2-204ENST00000401874 CRIP1P50238 77 aa12.64□□□□□ -0.39
TSC2-204ENST00000401874 Q6ZUT4 128 aa12.64□□□□□ -0.39
TSC2-204ENST00000401874 PTH2Q96A98 100 aa12.64□□□□□ -0.39
TSC2-204ENST00000401874 MAP6D1Q9H9H5 199 aa12.64□□□□□ -0.39
TSC2-204ENST00000401874 LINC01548A6NM66 108 aa12.63□□□□□ -0.39
TSC2-204ENST00000401874 NDUFA1O15239 70 aa12.63□□□□□ -0.39
TSC2-204ENST00000401874 PKIGQ9Y2B9 76 aa12.63□□□□□ -0.39
TSC2-204ENST00000401874 MRAPQ8TCY5 172 aa12.63□□□□□ -0.39
TSC2-204ENST00000401874 RPL18AQ02543 176 aaKnown RBP12.63□□□□□ -0.39
TSC2-204ENST00000401874 ZFAND3Q9H8U3 227 aa12.63□□□□□ -0.39
TSC2-204ENST00000401874 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 SPANXB1Q9NS25 103 aaPredicted RBP12.62□□□□□ -0.39
TSC2-204ENST00000401874 PSMB8P28062 276 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 ARHGAP21Q5T5U3 1957 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 UBE2BP63146 152 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 RNF185Q96GF1 192 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 IGLV2-11P01706 119 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 C22orf34Q6ZV56 151 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 Q9HAA7 133 aa12.62□□□□□ -0.39
TSC2-204ENST00000401874 IGHV3-30P01768 117 aa12.61□□□□□ -0.39
TSC2-204ENST00000401874 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
TSC2-204ENST00000401874 IGHV3-30-5P0DP03 117 aa12.61□□□□□ -0.39
TSC2-204ENST00000401874 CEMP1Q6PRD7 247 aaPredicted RBP12.61□□□□□ -0.39
TSC2-204ENST00000401874 NRGNQ92686 78 aa12.61□□□□□ -0.39
TSC2-204ENST00000401874 NCR3O14931 201 aa12.61□□□□□ -0.39
TSC2-204ENST00000401874 C20orf173Q96LM9 149 aa12.61□□□□□ -0.39
TSC2-204ENST00000401874 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
TSC2-204ENST00000401874 SMAD5-AS1Q9Y6J3 95 aa12.6□□□□□ -0.39
TSC2-204ENST00000401874 K7EQG2 157 aa12.6□□□□□ -0.39
TSC2-204ENST00000401874 SMIM20Q8N5G0 67 aa12.6□□□□□ -0.39
TSC2-204ENST00000401874 TMEM256-PLSCR3K7ERE1 68 aa12.59□□□□□ -0.39
TSC2-204ENST00000401874 LINC00643Q86TS7 51 aa12.59□□□□□ -0.39
TSC2-204ENST00000401874 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
TSC2-204ENST00000401874 TMEM223A0PJW6 202 aa12.59□□□□□ -0.39
TSC2-204ENST00000401874 NOTCH3Q9UM47 2321 aa12.59□□□□□ -0.39
TSC2-204ENST00000401874 SPAG11BQ08648 103 aa12.59□□□□□ -0.39
TSC2-204ENST00000401874 MED13LQ71F56 2210 aa12.58□□□□□ -0.4
TSC2-204ENST00000401874 J3KT08 172 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 NREPQ16612 68 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 DIRC1Q969H9 104 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 P0DMU3 169 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 ZNF22P17026 224 aaPredicted RBP12.57□□□□□ -0.4
TSC2-204ENST00000401874 HIST2H2BDQ6DRA6 164 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 ZFAND2AQ8N6M9 145 aa12.57□□□□□ -0.4
TSC2-204ENST00000401874 TNRC6BQ9UPQ9 1833 aaKnown RBP12.57□□□□□ -0.4
TSC2-204ENST00000401874 C10orf142B7Z368 130 aa12.56□□□□□ -0.4
TSC2-204ENST00000401874 MAPKAPK5-AS1Q8N8E1 139 aa12.56□□□□□ -0.4
TSC2-204ENST00000401874 PDE6GP18545 87 aa12.56□□□□□ -0.4
TSC2-204ENST00000401874 IGLV4-3A0A075B6K6 122 aa12.56□□□□□ -0.4
TSC2-204ENST00000401874 PCDH15Q96QU1 1955 aa12.55□□□□□ -0.4
TSC2-204ENST00000401874 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
TSC2-204ENST00000401874 CCL18P55774 89 aa12.55□□□□□ -0.4
TSC2-204ENST00000401874 TIRAPP58753 221 aa12.55□□□□□ -0.4
TSC2-204ENST00000401874 PCNX3Q9H6A9 2034 aa12.55□□□□□ -0.4
TSC2-204ENST00000401874 H7C423 109 aa12.54□□□□□ -0.4
TSC2-204ENST00000401874 LINC00467Q9BRT7 94 aa12.54□□□□□ -0.4
TSC2-204ENST00000401874 M0QY20 66 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms