RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
SKA3-203ENST00000400018 Q9UF83 564 aa8.49□□□□□ -1.05
SKA3-203ENST00000400018 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
SKA3-203ENST00000400018 Q6AWC8 147 aa8.48□□□□□ -1.05
SKA3-203ENST00000400018 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
SKA3-203ENST00000400018 TMEM97Q5BJF2 176 aa8.48□□□□□ -1.05
SKA3-203ENST00000400018 FAM74A4Q5TZK3 123 aa8.48□□□□□ -1.05
SKA3-203ENST00000400018 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
SKA3-203ENST00000400018 MRPL16Q9NX20 251 aaKnown RBP8.48□□□□□ -1.05
SKA3-203ENST00000400018 TGP01266 2768 aa8.48□□□□□ -1.05
SKA3-203ENST00000400018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.47□□□□□ -1.05
SKA3-203ENST00000400018 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 HLA-DQA1P01909 254 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 LEPP41159 167 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 HERV-K104P63124 156 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 C14orf178Q8N769 122 aaPredicted RBP8.47□□□□□ -1.05
SKA3-203ENST00000400018 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 IGLC6P0CF74 106 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 DEFB121Q5J5C9 76 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 SPANXN1Q5VSR9 72 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 COX8CQ7Z4L0 72 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
SKA3-203ENST00000400018 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.05
SKA3-203ENST00000400018 H3BRM9 83 aa8.46□□□□□ -1.05
SKA3-203ENST00000400018 SEC11AP67812 179 aa8.46□□□□□ -1.05
SKA3-203ENST00000400018 SYS1-DBNDD2H3BUS1 97 aa8.46□□□□□ -1.06
SKA3-203ENST00000400018 STAB2Q8WWQ8 2551 aa8.46□□□□□ -1.06
SKA3-203ENST00000400018 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 TSPAN13O95857 204 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 INSL3P51460 131 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 PHLDA3Q9Y5J5 127 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 A0A1W2PPM0 123 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 ASIPP42127 132 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 INSP01308 110 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 CSNK1G2-AS1Q8NCQ2 148 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
SKA3-203ENST00000400018 A0A1B0GXF2 115 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 HBBP68871 147 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 SPATA25Q9BR10 227 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 TMEM191AQ9H0A3 160 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
SKA3-203ENST00000400018 HUWE1Q7Z6Z7 4374 aaKnown RBP8.44□□□□□ -1.06
SKA3-203ENST00000400018 A6NDN8 102 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 MGPP08493 103 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 P0DMU3 169 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
SKA3-203ENST00000400018 LYSTQ99698 3801 aa8.43□□□□□ -1.06
SKA3-203ENST00000400018 LOC389332A0A1B0GUA5 103 aa8.43□□□□□ -1.06
SKA3-203ENST00000400018 TCTAP57738 103 aa8.43□□□□□ -1.06
SKA3-203ENST00000400018 Q6ZTI0 123 aa8.43□□□□□ -1.06
SKA3-203ENST00000400018 A8MTW9 85 aa8.43□□□□□ -1.06
SKA3-203ENST00000400018 ZNF876PQ49A33 203 aa8.43□□□□□ -1.06
SKA3-203ENST00000400018 RNF183Q96D59 192 aa8.43□□□□□ -1.06
SKA3-203ENST00000400018 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 COX8AP10176 69 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 COX19Q49B96 90 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 FABP2P12104 132 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 WFDC2Q14508 124 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 ODF1Q14990 250 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 CT83Q5H943 113 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 SH2D6Q7Z4S9 175 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
SKA3-203ENST00000400018 TRGV1A0A0A0MS02 117 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 IGHV1-24A0A0C4DH33 117 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 D6R8Y8 96 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 K7EIL1 84 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 Q6ZSN1 163 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 TENM2Q9NT68 2774 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
SKA3-203ENST00000400018 RPL39LQ96EH5 51 aaKnown RBP8.41□□□□□ -1.06
SKA3-203ENST00000400018 GAGE7O76087 117 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 SBSPONQ8IVN8 264 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 RNF185Q96GF1 192 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 PLAC8L1A1L4L8 177 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 J3QR89 54 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 MRPL51Q4U2R6 128 aaKnown RBP8.4□□□□□ -1.06
SKA3-203ENST00000400018 FA2HQ7L5A8 372 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 OR11H2Q8NH07 326 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 ODF3Q96PU9 254 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 GFRA4Q9GZZ7 299 aa8.4□□□□□ -1.06
SKA3-203ENST00000400018 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.06
SKA3-203ENST00000400018 F5H697 171 aa8.39□□□□□ -1.07
SKA3-203ENST00000400018 EGFEM1PQ0D2K5 195 aa8.39□□□□□ -1.07
SKA3-203ENST00000400018 X6R8D5 127 aa8.39□□□□□ -1.07
SKA3-203ENST00000400018 A0A1B0GW15 77 aa8.39□□□□□ -1.07
SKA3-203ENST00000400018 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
SKA3-203ENST00000400018 POM121L12Q8N7R1 296 aa8.39□□□□□ -1.07
SKA3-203ENST00000400018 CELA1Q9UNI1 258 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms