RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SPATA12Q7Z6I5 190 aa10.79□□□□□ -0.68
PCDHGA11-201ENST00000398587 TRBV7-3A0A075B6L6 115 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 PRSS47A8MTI9 375 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 CDSNQ15517 529 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 GYPEP15421 78 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 ODF1Q14990 250 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 H3BMG7 143 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 H3BMM0 161 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 ATP5G1P05496 136 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 SPART-AS1P0CW21 52 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 XCL1P47992 114 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 HERV-K104P63124 156 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 BAALCQ8WXS3 180 aa10.78□□□□□ -0.68
PCDHGA11-201ENST00000398587 CFC1BP0CG36 223 aa10.77□□□□□ -0.68
PCDHGA11-201ENST00000398587 CFC1P0CG37 223 aa10.77□□□□□ -0.68
PCDHGA11-201ENST00000398587 HIGD1BQ9P298 99 aa10.77□□□□□ -0.68
PCDHGA11-201ENST00000398587 AMTNQ6UX39 209 aa10.77□□□□□ -0.69
PCDHGA11-201ENST00000398587 ABCA12Q86UK0 2595 aa10.77□□□□□ -0.69
PCDHGA11-201ENST00000398587 TEX48A0A1B0GUV7 120 aa10.77□□□□□ -0.69
PCDHGA11-201ENST00000398587 IFITM1P13164 125 aa10.77□□□□□ -0.69
PCDHGA11-201ENST00000398587 MRPL23Q16540 153 aaKnown RBP10.77□□□□□ -0.69
PCDHGA11-201ENST00000398587 WFDC11Q8NEX6 87 aa10.77□□□□□ -0.69
PCDHGA11-201ENST00000398587 Q6ZVH6 145 aa10.76□□□□□ -0.69
PCDHGA11-201ENST00000398587 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
PCDHGA11-201ENST00000398587 SMAD5-AS1Q9Y6J3 95 aa10.76□□□□□ -0.69
PCDHGA11-201ENST00000398587 E9PLD3 99 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 C5orf38Q86SI9 138 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 ZNF843Q8N446 348 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 RMI2Q96E14 147 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 PRRC2AP48634 2157 aaKnown RBP10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 INSL3P51460 131 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 ZFYVE26Q68DK2 2539 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 CRIP1P50238 77 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
PCDHGA11-201ENST00000398587 Q6ZQT7 251 aa10.74□□□□□ -0.69
PCDHGA11-201ENST00000398587 EXPH5Q8NEV8 1989 aa10.74□□□□□ -0.69
PCDHGA11-201ENST00000398587 CPAMD8Q8IZJ3 1885 aa10.74□□□□□ -0.69
PCDHGA11-201ENST00000398587 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
PCDHGA11-201ENST00000398587 C11orf86A6NJI1 115 aa10.74□□□□□ -0.69
PCDHGA11-201ENST00000398587 JMJD1CQ15652 2540 aa10.74□□□□□ -0.69
PCDHGA11-201ENST00000398587 C20orf173Q96LM9 149 aa10.73□□□□□ -0.69
PCDHGA11-201ENST00000398587 ZFAND2AQ8N6M9 145 aa10.73□□□□□ -0.69
PCDHGA11-201ENST00000398587 EML5Q05BV3 1969 aa10.73□□□□□ -0.69
PCDHGA11-201ENST00000398587 IGLV2-11P01706 119 aa10.73□□□□□ -0.69
PCDHGA11-201ENST00000398587 NKAPP1Q8N9T2 125 aa10.73□□□□□ -0.69
PCDHGA11-201ENST00000398587 SETD2Q9BYW2 2564 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA11-201ENST00000398587 SOCS3O14543 225 aa10.73□□□□□ -0.69
PCDHGA11-201ENST00000398587 IGLL5B9A064 214 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 F8WEM9 126 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 DEFB114Q30KQ6 69 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 ZMAT4Q9H898 229 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 ICOSQ9Y6W8 199 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 CCL25O15444 150 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 CRLF1O75462 422 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 HHLA3Q9XRX5 114 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 FXYD2P54710 66 aa10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 HIST1H4AP62805 103 aaKnown RBP10.72□□□□□ -0.69
PCDHGA11-201ENST00000398587 CARD19Q96LW7 228 aa10.71□□□□□ -0.69
PCDHGA11-201ENST00000398587 DSCAML1Q8TD84 2053 aa10.71□□□□□ -0.69
PCDHGA11-201ENST00000398587 A4D1N5 150 aa10.71□□□□□ -0.69
PCDHGA11-201ENST00000398587 PSMB8P28062 276 aa10.7□□□□□ -0.7
PCDHGA11-201ENST00000398587 Q6ZSV7 163 aa10.7□□□□□ -0.7
PCDHGA11-201ENST00000398587 DEFB135Q30KP9 77 aa10.7□□□□□ -0.7
PCDHGA11-201ENST00000398587 TP53TG3Q9ULZ0 132 aa10.7□□□□□ -0.7
PCDHGA11-201ENST00000398587 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
PCDHGA11-201ENST00000398587 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
PCDHGA11-201ENST00000398587 PSMG3-AS1Q96PY0 264 aa10.69□□□□□ -0.7
PCDHGA11-201ENST00000398587 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
PCDHGA11-201ENST00000398587 VSIG2Q96IQ7 327 aa10.69□□□□□ -0.7
PCDHGA11-201ENST00000398587 C1orf43Q9BWL3 253 aa10.69□□□□□ -0.7
PCDHGA11-201ENST00000398587 IGKV2D-24A0A075B6R9 120 aa10.68□□□□□ -0.7
PCDHGA11-201ENST00000398587 COX7A2LO14548 114 aa10.68□□□□□ -0.7
PCDHGA11-201ENST00000398587 NDUFA11Q86Y39 141 aa10.67□□□□□ -0.7
PCDHGA11-201ENST00000398587 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
PCDHGA11-201ENST00000398587 DNAH12Q6ZR08 3092 aa10.67□□□□□ -0.7
PCDHGA11-201ENST00000398587 ESM1Q9NQ30 184 aa10.67□□□□□ -0.7
PCDHGA11-201ENST00000398587 NTN5Q8WTR8 489 aaPredicted RBP10.67□□□□□ -0.7
PCDHGA11-201ENST00000398587 LRRK2Q5S007 2527 aa10.67□□□□□ -0.7
PCDHGA11-201ENST00000398587 COX7B2Q8TF08 81 aa10.67□□□□□ -0.7
PCDHGA11-201ENST00000398587 TAX1BP3O14907 124 aa10.66□□□□□ -0.7
PCDHGA11-201ENST00000398587 MRAPQ8TCY5 172 aa10.66□□□□□ -0.7
PCDHGA11-201ENST00000398587 IGLV10-54A0A075B6I4 117 aa10.66□□□□□ -0.7
PCDHGA11-201ENST00000398587 IGLV1-40P01703 118 aa10.66□□□□□ -0.7
PCDHGA11-201ENST00000398587 ZNF702PQ9H963 129 aa10.66□□□□□ -0.7
PCDHGA11-201ENST00000398587 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
PCDHGA11-201ENST00000398587 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
PCDHGA11-201ENST00000398587 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
PCDHGA11-201ENST00000398587 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA11-201ENST00000398587 Q6ZTI0 123 aa10.65□□□□□ -0.7
PCDHGA11-201ENST00000398587 U3KQK5 164 aa10.65□□□□□ -0.7
PCDHGA11-201ENST00000398587 RNF185Q96GF1 192 aa10.64□□□□□ -0.71
PCDHGA11-201ENST00000398587 FN1P02751 2386 aaKnown RBP10.64□□□□□ -0.71
PCDHGA11-201ENST00000398587 A0A1W2PPR1 153 aa10.64□□□□□ -0.71
PCDHGA11-201ENST00000398587 RPL32P62910 135 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms