RNA–Protein interactions for RNA: ENST00000398460.3

MEG3-201, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 3,382 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-201ENST00000398460 GAGE5Q13069 117 aa9.13□□□□□ -0.95
MEG3-201ENST00000398460 GAGE6Q13070 117 aa9.13□□□□□ -0.95
MEG3-201ENST00000398460 C10orf99Q6UWK7 81 aa9.13□□□□□ -0.95
MEG3-201ENST00000398460 DUX5Q96PT3 197 aa9.13□□□□□ -0.95
MEG3-201ENST00000398460 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
MEG3-201ENST00000398460 HTN1P15515 57 aa9.13□□□□□ -0.95
MEG3-201ENST00000398460 SHISA2Q6UWI4 295 aa9.13□□□□□ -0.95
MEG3-201ENST00000398460 TRAV12-2A0A075B6T6 113 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 CRLF1O75462 422 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 IGLV1-40P01703 118 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 RNASE3P12724 160 aaKnown RBP9.12□□□□□ -0.95
MEG3-201ENST00000398460 JPT2Q9H910 190 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 CCDC179H3BU77 68 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 TRAV4A0A0B4J268 109 aa9.12□□□□□ -0.95
MEG3-201ENST00000398460 HERV-K104P63124 156 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 ZNF56Q15929 161 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 Q1RN00 199 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 CHD6Q8TD26 2715 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 NDUFA11Q86Y39 141 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 BAALCQ8WXS3 180 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 TOMM6Q96B49 74 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
MEG3-201ENST00000398460 ZNF256Q9Y2P7 627 aaPredicted RBP9.11□□□□□ -0.95
MEG3-201ENST00000398460 PRB1P04280 392 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 LINC01356Q8N9X3 169 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 K7EMT4 169 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 DUSP14O95147 198 aaKnown RBP9.1□□□□□ -0.95
MEG3-201ENST00000398460 MED14OSP0DP75 135 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 KHDC1LQ5JSQ8 128 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 SNCGO76070 127 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 DSCR9P59020 149 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 SPINK13Q1W4C9 94 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 TP53TG1Q9Y2A0 90 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 NF1P21359 2839 aa9.1□□□□□ -0.95
MEG3-201ENST00000398460 TRAV12-1A0A0B4J245 112 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 TRBV7-9A0A0J9YWB2 115 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 SLC25A20O43772 301 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 BRI3O95415 125 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 CFC1BP0CG36 223 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 CFC1P0CG37 223 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 NEXN-AS1Q8NBZ9 246 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
MEG3-201ENST00000398460 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
MEG3-201ENST00000398460 NHLRC4P0CG21 123 aaPredicted RBP9.08□□□□□ -0.96
MEG3-201ENST00000398460 PSMB8P28062 276 aa9.08□□□□□ -0.96
MEG3-201ENST00000398460 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
MEG3-201ENST00000398460 SUMO4Q6EEV6 95 aa9.08□□□□□ -0.96
MEG3-201ENST00000398460 ATP6V0E2Q8NHE4 81 aa9.08□□□□□ -0.96
MEG3-201ENST00000398460 SDHAF1A6NFY7 115 aa9.08□□□□□ -0.96
MEG3-201ENST00000398460 KLLNB2CW77 178 aa9.08□□□□□ -0.96
MEG3-201ENST00000398460 VCYO14598 125 aa9.08□□□□□ -0.96
MEG3-201ENST00000398460 UBE2D1P51668 147 aa9.08□□□□□ -0.96
MEG3-201ENST00000398460 PRRC2AP48634 2157 aaKnown RBP9.08□□□□□ -0.96
MEG3-201ENST00000398460 TRAV2A0A0B4J234 112 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 COX6B1P14854 86 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 HERVK_113P61574 105 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 UBE2D3P61077 147 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 UBE2D2P62837 147 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 FAM19A4Q96LR4 140 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 FN1P02751 2386 aaKnown RBP9.07□□□□□ -0.96
MEG3-201ENST00000398460 TEX15Q9BXT5 2789 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 TEX49A0A1B0GTD5 131 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 RNF223E7ERA6 249 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 MDFICQ9P1T7 246 aa9.07□□□□□ -0.96
MEG3-201ENST00000398460 A0A0J9YY99 117 aa9.06□□□□□ -0.96
MEG3-201ENST00000398460 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
MEG3-201ENST00000398460 FLNBO75369 2602 aaKnown RBP9.06□□□□□ -0.96
MEG3-201ENST00000398460 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
MEG3-201ENST00000398460 HELZ2Q9BYK8 2649 aaKnown RBP9.06□□□□□ -0.96
MEG3-201ENST00000398460 ADARB2-AS1A8MUL3 147 aa9.06□□□□□ -0.96
MEG3-201ENST00000398460 ELANEP08246 267 aa9.06□□□□□ -0.96
MEG3-201ENST00000398460 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
MEG3-201ENST00000398460 CFHR3Q02985 330 aa9.06□□□□□ -0.96
MEG3-201ENST00000398460 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
MEG3-201ENST00000398460 FBN2P35556 2912 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 A4D1N5 150 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 NPC2P61916 151 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 LYRM7Q5U5X0 104 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 APRG1Q8IVJ8 170 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 Q8N1Y9 231 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 IGHV1OR15-1A0A075B7D0 117 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 A0A0J9YX75 114 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 GAGE7O76087 117 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 GAGE4Q13068 117 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 ZNF876PQ49A33 203 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 C10orf126Q8N4M7 172 aa9.05□□□□□ -0.96
MEG3-201ENST00000398460 IGHV4OR15-8A0A075B7B6 117 aa9.04□□□□□ -0.96
MEG3-201ENST00000398460 A0A087WW49 117 aa9.04□□□□□ -0.96
MEG3-201ENST00000398460 HOXD3P31249 432 aaPredicted RBP9.04□□□□□ -0.96
MEG3-201ENST00000398460 VPREB3Q9UKI3 123 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms