RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MDFICQ9P1T7 246 aa8.41□□□□□ -1.06
HPS4-202ENST00000398145 HAMPP81172 84 aa8.41□□□□□ -1.06
HPS4-202ENST00000398145 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
HPS4-202ENST00000398145 TMEM126AQ9H061 195 aa8.4□□□□□ -1.06
HPS4-202ENST00000398145 SIRPDQ9H106 197 aa8.4□□□□□ -1.06
HPS4-202ENST00000398145 SONP18583 2426 aaKnown RBP8.4□□□□□ -1.06
HPS4-202ENST00000398145 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.06
HPS4-202ENST00000398145 RPL32P62910 135 aaKnown RBP8.4□□□□□ -1.06
HPS4-202ENST00000398145 IGHV4-59P01825 116 aa8.4□□□□□ -1.07
HPS4-202ENST00000398145 NSUN5P1Q3KNT7 163 aa8.4□□□□□ -1.07
HPS4-202ENST00000398145 SPATA25Q9BR10 227 aa8.4□□□□□ -1.07
HPS4-202ENST00000398145 CEP192Q8TEP8 1941 aa8.4□□□□□ -1.07
HPS4-202ENST00000398145 DSCAMO60469 2012 aa8.4□□□□□ -1.07
HPS4-202ENST00000398145 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 NRACQ8N912 160 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 H0YGX0 51 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 TRBV12-3P01733 135 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 MAPK1IP1LQ8NDC0 245 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 IGF1P05019 195 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 Q71RC1 249 aaPredicted RBP8.39□□□□□ -1.07
HPS4-202ENST00000398145 IGHV4-61A0A0C4DH41 118 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 ATOX1O00244 68 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 CNFNQ9BYD5 112 aa8.39□□□□□ -1.07
HPS4-202ENST00000398145 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 IGHG2P01859 326 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 GPHB5Q86YW7 130 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 LINC01548A6NM66 108 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 CRLF1O75462 422 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 FSTL3O95633 263 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 DEFB112Q30KQ8 113 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 ZFAND2AQ8N6M9 145 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 RNF152Q8N8N0 203 aa8.38□□□□□ -1.07
HPS4-202ENST00000398145 MIAQ16674 131 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 ORMDL1Q9P0S3 153 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 A0A0J9YX75 114 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 INSL3P51460 131 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 C3orf56Q8N813 242 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 TNRC6BQ9UPQ9 1833 aaKnown RBP8.37□□□□□ -1.07
HPS4-202ENST00000398145 TRBV7-3A0A075B6L6 115 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 J3QLI3 93 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 IGHV3-33P01772 117 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 EBI3Q14213 229 aa8.37□□□□□ -1.07
HPS4-202ENST00000398145 IGF2RP11717 2491 aa8.36□□□□□ -1.07
HPS4-202ENST00000398145 LINC00643Q86TS7 51 aa8.36□□□□□ -1.07
HPS4-202ENST00000398145 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
HPS4-202ENST00000398145 A0A1B0GX51 115 aa8.36□□□□□ -1.07
HPS4-202ENST00000398145 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
HPS4-202ENST00000398145 CEMP1Q6PRD7 247 aaPredicted RBP8.36□□□□□ -1.07
HPS4-202ENST00000398145 VPREB3Q9UKI3 123 aa8.36□□□□□ -1.07
HPS4-202ENST00000398145 COL5A1P20908 1838 aaPredicted RBP8.35□□□□□ -1.07
HPS4-202ENST00000398145 A0A096LNJ9 63 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 NOP10Q9NPE3 64 aaKnown RBP8.35□□□□□ -1.07
HPS4-202ENST00000398145 DEFB136Q30KP8 78 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 Q8NA96 180 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 DAZ2Q13117 558 aaKnown RBP8.35□□□□□ -1.07
HPS4-202ENST00000398145 DAZ4Q86SG3 579 aaKnown RBP8.35□□□□□ -1.07
HPS4-202ENST00000398145 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 DAZ3Q9NR90 486 aaKnown RBP8.35□□□□□ -1.07
HPS4-202ENST00000398145 P0DMU3 169 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 RBMY1FQ15415 496 aaKnown RBP8.35□□□□□ -1.07
HPS4-202ENST00000398145 APRG1Q8IVJ8 170 aa8.35□□□□□ -1.07
HPS4-202ENST00000398145 CCDC168Q8NDH2 2452 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 C20orf173Q96LM9 149 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 NAV2Q8IVL1 2488 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 XGP55808 180 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 NFE4Q86UQ8 179 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 IGHV4-4A0A075B6R2 117 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 TMEM223A0PJW6 202 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 XCL1P47992 114 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 ADORA2A-AS1P86434 159 aa8.34□□□□□ -1.07
HPS4-202ENST00000398145 MRPL23Q16540 153 aaKnown RBP8.34□□□□□ -1.07
HPS4-202ENST00000398145 EXPH5Q8NEV8 1989 aa8.34□□□□□ -1.08
HPS4-202ENST00000398145 IGHV3-30P01768 117 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 IGHV3-30-5P0DP03 117 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 TRBV27A0A0K0K1C4 114 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 MRPS12O15235 138 aaKnown RBP8.33□□□□□ -1.08
HPS4-202ENST00000398145 SLURP1P55000 103 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 TRIAP1O43715 76 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 TRAV4A0A0B4J268 109 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 J3KT08 172 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 ZMAT4Q9H898 229 aa8.33□□□□□ -1.08
HPS4-202ENST00000398145 AGRNO00468 2067 aa8.32□□□□□ -1.08
HPS4-202ENST00000398145 IGHV4OR15-8A0A075B7B6 117 aa8.32□□□□□ -1.08
HPS4-202ENST00000398145 A0A087WW49 117 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms