RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TIMM17AQ99595 171 aa5□□□□□ -1.61
TM9SF4-202ENST00000398022 M0R378 163 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 MED14OSP0DP75 135 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 RPL27AP46776 148 aaKnown RBP4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 SS18Q15532 418 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 ZNF56Q15929 161 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 RAI1Q7Z5J4 1906 aaPredicted RBP4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 ROS1P08922 2347 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 J3QL48 77 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 TIMM17BO60830 172 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 WT1-ASQ06250 92 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 RIGQ13278 110 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 FAM19A3Q7Z5A8 133 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 ESM1Q9NQ30 184 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 ABCA1O95477 2261 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 DYSFO75923 2080 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 TRBV27A0A0K0K1C4 114 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 IGHV3-48P01763 117 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 CEMP1Q6PRD7 247 aaPredicted RBP4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 PATE2Q6UY27 113 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 Q9H3A6 140 aa4.99□□□□□ -1.61
TM9SF4-202ENST00000398022 IL4P05112 153 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 INAFM2P0DMQ5 153 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 CCL3L1P16619 93 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 C10orf55Q5SWW7 151 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 GDF5OSQ5U4N7 250 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 ZNRD1Q9P1U0 126 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 TMEM256-PLSCR3K7ERE1 68 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 HCP5Q6MZN7 132 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 CLEC19AQ6UXS0 136 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 NUP37Q8NFH4 326 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 AKAP6Q13023 2319 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 USP9YO00507 2555 aaPredicted RBP4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 TRAV8-3A0A0A6YYJ7 113 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 H3BVH4 76 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 LTAP01374 205 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 LYZP61626 148 aa4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 SUMO2P61956 95 aaKnown RBP4.98□□□□□ -1.61
TM9SF4-202ENST00000398022 IGKV1D-37A0A075B6S9 117 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 A0A1B0GUT8 65 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 CYSTM1Q9H1C7 97 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 A8MUN3 132 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 M0R381 172 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 HOXA3O43365 443 aaPredicted RBP4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 PSMB2P49721 201 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 HIST1H4AP62805 103 aaKnown RBP4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 TMEM170BQ5T4T1 132 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 PRNTQ86SH4 94 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 TMEM243Q9BU79 118 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 DYNLRB1Q9NP97 96 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 PCNX1Q96RV3 2341 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 A0A0G2JNJ9 132 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 ACYP1P07311 99 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 PRSS1P07477 247 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 SYNJ2BPP57105 145 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 TNP2Q05952 138 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 PLGLAQ15195 96 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 TMEM155Q4W5P6 130 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 C7orf69Q9H7B7 122 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 Q9UFV3 132 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 ANKRD17O75179 2603 aaKnown RBP4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 LST1O00453 97 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 Q86TA4 180 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 ZNF414Q96IQ9 312 aa4.97□□□□□ -1.61
TM9SF4-202ENST00000398022 PLXNB1O43157 2135 aa4.96□□□□□ -1.61
TM9SF4-202ENST00000398022 C19orf71A6NCJ1 209 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 E7EUB6 86 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 C16orf97H3BN30 126 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 SLC25A16P16260 332 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 ATP5EP56381 51 aaPredicted RBP4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 ARFGEF3Q5TH69 2177 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 LCA10Q71F78 164 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 HIST1H4GQ99525 98 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 PKDREJQ9NTG1 2253 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 IGLV2-23P01705 113 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 LINC01600Q96MT4 127 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 ZFAND3Q9H8U3 227 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 FAM30AQ9NZY2 134 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 TMEM14CQ9P0S9 112 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 LINC00643Q86TS7 51 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 CTSZQ9UBR2 303 aa4.96□□□□□ -1.62
TM9SF4-202ENST00000398022 MYO9AB2RTY4 2548 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 TMSB15BA0A087X1C1 80 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 IGHV3-21A0A0B4J1V1 117 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 IGHV3-72A0A0B4J1Y9 119 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 Q75L30 129 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 MRPL36Q9P0J6 103 aaKnown RBP4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 FAM215AQ9Y5M1 114 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 RBMY1BA6NDE4 496 aaKnown RBP4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 RBMY1EA6NEQ0 496 aaKnown RBP4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 FSTL3O95633 263 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 RBMY1DP0C7P1 496 aaKnown RBP4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 RBMY1A1P0DJD3 496 aaKnown RBP4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 NSUN5P1Q3KNT7 163 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 TRBV6-1A0A0K0K1D8 114 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 LOC389332A0A1B0GUA5 103 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 SLC25A20O43772 301 aa4.95□□□□□ -1.62
TM9SF4-202ENST00000398022 IGHV1-8P0DP01 117 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms