RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 ZNF479Q96JC4 524 aa5.41□□□□□ -1.54
LINC00887-201ENST00000397644 C11orf68Q9H3H3 251 aaKnown RBP5.41□□□□□ -1.54
LINC00887-201ENST00000397644 CELA1Q9UNI1 258 aa5.41□□□□□ -1.54
LINC00887-201ENST00000397644 KIF25-AS1Q9Y6Z4 181 aa5.41□□□□□ -1.54
LINC00887-201ENST00000397644 HUWE1Q7Z6Z7 4374 aaKnown RBP5.41□□□□□ -1.54
LINC00887-201ENST00000397644 HLA-DQA1P01909 254 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 MT-ND6P03923 174 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 ATP5G1P05496 136 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 CKS2P33552 79 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 NANOS2P60321 138 aaKnown RBP5.4□□□□□ -1.54
LINC00887-201ENST00000397644 ZNF56Q15929 161 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 KIAA1644Q3SXP7 199 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 MRPL51Q4U2R6 128 aaKnown RBP5.4□□□□□ -1.54
LINC00887-201ENST00000397644 ZFP2Q6ZN57 461 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 LINC00612Q8N6U2 182 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 WWC2-AS2Q96NR7 200 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 HHLA3Q9XRX5 114 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 U3KQK5 164 aa5.4□□□□□ -1.54
LINC00887-201ENST00000397644 MUC4Q99102 2169 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 F5H768 121 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 RHODO00212 210 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 TRGC2P03986 189 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 HOXA5P20719 270 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 LINC00315P59091 139 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 SLAQ13239 276 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 FHL2Q14192 279 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 GATD1Q8NB37 220 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 RNF185Q96GF1 192 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 C18orf15Q96N68 181 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 DNAH7Q8WXX0 4024 aa5.39□□□□□ -1.55
LINC00887-201ENST00000397644 H7C1H1 209 aa5.38□□□□□ -1.55
LINC00887-201ENST00000397644 PPBPP02775 128 aa5.38□□□□□ -1.55
LINC00887-201ENST00000397644 UFSP1Q6NVU6 142 aa5.38□□□□□ -1.55
LINC00887-201ENST00000397644 Q6ZSN1 163 aa5.38□□□□□ -1.55
LINC00887-201ENST00000397644 MRAP2Q96G30 205 aa5.38□□□□□ -1.55
LINC00887-201ENST00000397644 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
LINC00887-201ENST00000397644 DEFB131BA0A096LNP1 70 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 TRAV26-2A0A0B4J265 109 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 D6R8Y8 96 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 PPP1R17O96001 155 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 GATA1P15976 413 aaPredicted RBP5.37□□□□□ -1.55
LINC00887-201ENST00000397644 SUMO4Q6EEV6 95 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 Q6ZTC4 211 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 ORMDL3Q8N138 153 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 SLC25A29Q8N8R3 303 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 PRELID3AQ96N28 172 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 PRADC1Q9BSG0 188 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 NIT2Q9NQR4 276 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 PRO0255Q9UI72 69 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 TNFRSF18Q9Y5U5 241 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 TENM3Q9P273 2699 aa5.37□□□□□ -1.55
LINC00887-201ENST00000397644 TRAV10A0A0B4J240 114 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 A0A0J9YY99 117 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 TRBV6-4A0A1B0GX49 114 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 C1orf196B1AJZ1 125 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 M0QY20 66 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 NCR2O95944 276 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 CRYBA4P53673 196 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 OR10J3Q5JRS4 329 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 ZNRF2Q8NHG8 242 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 ALKBH7Q9BT30 221 aaPredicted RBP5.36□□□□□ -1.55
LINC00887-201ENST00000397644 ST20Q9HBF5 79 aa5.36□□□□□ -1.55
LINC00887-201ENST00000397644 RYR3Q15413 4870 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 TRAV26-1A0A087WT03 109 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 LOC389332A0A1B0GUA5 103 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 K7EQD1 137 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 GAS8-AS1O95177 125 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 P0DMU3 169 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 FAM231AP0DMU4 169 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 FAM231CP0DMU5 169 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 SRIP30626 198 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 RPL36AP83881 106 aaKnown RBP5.35□□□□□ -1.55
LINC00887-201ENST00000397644 PRSS3P2Q8NHM4 247 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 RPL36ALQ969Q0 106 aaKnown RBP5.35□□□□□ -1.55
LINC00887-201ENST00000397644 RPL39LQ96EH5 51 aaKnown RBP5.35□□□□□ -1.55
LINC00887-201ENST00000397644 DNAJC30Q96LL9 226 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 EDA2RQ9HAV5 297 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 STAB2Q8WWQ8 2551 aa5.35□□□□□ -1.55
LINC00887-201ENST00000397644 STARD9Q9P2P6 4700 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 TRBV7-3A0A075B6L6 115 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 TRBV10-1A0A0K0K1A3 114 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 GAGE12JA6NER3 117 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 VCYO14598 125 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 NPYP01303 97 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 PMCHP20382 165 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 GAGE1Q13065 139 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 GAGE4Q13068 117 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 GAGE5Q13069 117 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 RHOHQ15669 191 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 NEXN-AS1Q8NBZ9 246 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 PHLDA1Q8WV24 401 aaPredicted RBP5.34□□□□□ -1.55
LINC00887-201ENST00000397644 C20orf78Q9BR46 151 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 Q9UF83 564 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 LAMTOR2Q9Y2Q5 125 aa5.34□□□□□ -1.55
LINC00887-201ENST00000397644 LOC100131303A0A0U1RQF7 123 aa5.33□□□□□ -1.56
LINC00887-201ENST00000397644 IGLL5B9A064 214 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms