RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 HNRNPA3P51991 378 aaKnown RBP10.79□□□□□ -0.68
CAPN3-207ENST00000397200 Q6ZN92 141 aa10.79□□□□□ -0.68
CAPN3-207ENST00000397200 SYT8Q8NBV8 401 aa10.79□□□□□ -0.68
CAPN3-207ENST00000397200 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
CAPN3-207ENST00000397200 LINC00467Q9BRT7 94 aa10.79□□□□□ -0.68
CAPN3-207ENST00000397200 GOLT1BQ9Y3E0 138 aa10.79□□□□□ -0.68
CAPN3-207ENST00000397200 PMCHL2Q9BQD1 86 aa10.78□□□□□ -0.68
CAPN3-207ENST00000397200 ATP5LO75964 103 aa10.77□□□□□ -0.68
CAPN3-207ENST00000397200 SMIM17P0DL12 118 aa10.77□□□□□ -0.68
CAPN3-207ENST00000397200 ORMDL2Q53FV1 153 aa10.77□□□□□ -0.68
CAPN3-207ENST00000397200 TMEM208Q9BTX3 173 aa10.77□□□□□ -0.68
CAPN3-207ENST00000397200 ZMAT4Q9H898 229 aa10.77□□□□□ -0.68
CAPN3-207ENST00000397200 TRBV6-5A0A0K0K1A5 114 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 TCAPO15273 167 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 ODF1Q14990 250 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 DEFB135Q30KP9 77 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 CSNK1G2-AS1Q8NCQ2 148 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 JPT2Q9H910 190 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 IGHV3OR16-12A0A075B7B8 117 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 PIK3CD-AS1Q5SR53 167 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 PTH2Q96A98 100 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 C18orf15Q96N68 181 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 LINC01587Q99440 93 aa10.76□□□□□ -0.69
CAPN3-207ENST00000397200 CRYGDP07320 174 aa10.75□□□□□ -0.69
CAPN3-207ENST00000397200 EDA2RQ9HAV5 297 aa10.75□□□□□ -0.69
CAPN3-207ENST00000397200 A0A1B0GV90 55 aa10.74□□□□□ -0.69
CAPN3-207ENST00000397200 COX8AP10176 69 aa10.74□□□□□ -0.69
CAPN3-207ENST00000397200 POLR2KP53803 58 aaKnown RBP10.74□□□□□ -0.69
CAPN3-207ENST00000397200 SLC25A34Q6PIV7 304 aa10.74□□□□□ -0.69
CAPN3-207ENST00000397200 SBSPONQ8IVN8 264 aa10.74□□□□□ -0.69
CAPN3-207ENST00000397200 TOMM6Q96B49 74 aa10.74□□□□□ -0.69
CAPN3-207ENST00000397200 CBY3A6NI87 242 aa10.73□□□□□ -0.69
CAPN3-207ENST00000397200 ANKRD39Q53RE8 183 aa10.73□□□□□ -0.69
CAPN3-207ENST00000397200 RNF183Q96D59 192 aa10.73□□□□□ -0.69
CAPN3-207ENST00000397200 A0A087WWL8 130 aa10.73□□□□□ -0.69
CAPN3-207ENST00000397200 NUDT3O95989 172 aa10.73□□□□□ -0.69
CAPN3-207ENST00000397200 HTN1P15515 57 aa10.73□□□□□ -0.69
CAPN3-207ENST00000397200 DKK2Q9UBU2 259 aa10.73□□□□□ -0.69
CAPN3-207ENST00000397200 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
CAPN3-207ENST00000397200 M0QY20 66 aa10.72□□□□□ -0.69
CAPN3-207ENST00000397200 FGF6P10767 208 aa10.72□□□□□ -0.69
CAPN3-207ENST00000397200 TP53TG1Q9Y2A0 90 aa10.72□□□□□ -0.69
CAPN3-207ENST00000397200 NACAE9PAV3 2078 aa10.71□□□□□ -0.69
CAPN3-207ENST00000397200 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
CAPN3-207ENST00000397200 LINC01549A6NIU2 74 aa10.71□□□□□ -0.69
CAPN3-207ENST00000397200 ZNF415Q09FC8 603 aa10.71□□□□□ -0.69
CAPN3-207ENST00000397200 ZNF876PQ49A33 203 aa10.71□□□□□ -0.69
CAPN3-207ENST00000397200 B9D2Q9BPU9 175 aa10.71□□□□□ -0.69
CAPN3-207ENST00000397200 RETNQ9HD89 108 aa10.71□□□□□ -0.69
CAPN3-207ENST00000397200 C11orf72Q8NBR9 251 aa10.7□□□□□ -0.7
CAPN3-207ENST00000397200 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
CAPN3-207ENST00000397200 SPATA25Q9BR10 227 aa10.7□□□□□ -0.7
CAPN3-207ENST00000397200 OVOL2Q9BRP0 275 aa10.7□□□□□ -0.7
CAPN3-207ENST00000397200 TP73-AS1Q9UF72 201 aa10.7□□□□□ -0.7
CAPN3-207ENST00000397200 MEGF8Q7Z7M0 2845 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 A0A087WX48 190 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 M0R2P5 195 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 VCYO14598 125 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 DLEU1O43261 78 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 PRSS1P07477 247 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 G0S2P27469 103 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 RRN3P1Q2M238 152 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 UFSP1Q6NVU6 142 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 TM2D3Q9BRN9 247 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 HHLA3Q9XRX5 114 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 X6R8D5 127 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 SMIM9A6NGZ8 99 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-207ENST00000397200 DPM2O94777 84 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 IGKCP01834 107 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 PRM2P04554 102 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 ZNF56Q15929 161 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 C2orf66Q6UXQ4 117 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
CAPN3-207ENST00000397200 SDHAF1A6NFY7 115 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 A8MWV9 139 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 F5H697 171 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 COL5A1-AS1Q5SY13 56 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 BOD1L2Q8IYS8 172 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 STPG4Q8N801 248 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 NBEAL2Q6ZNJ1 2754 aa10.68□□□□□ -0.7
CAPN3-207ENST00000397200 MIFP14174 115 aa10.67□□□□□ -0.7
CAPN3-207ENST00000397200 AZU1P20160 251 aa10.67□□□□□ -0.7
CAPN3-207ENST00000397200 ZFP2Q6ZN57 461 aa10.67□□□□□ -0.7
CAPN3-207ENST00000397200 ERASQ7Z444 233 aa10.67□□□□□ -0.7
CAPN3-207ENST00000397200 NEXN-AS1Q8NBZ9 246 aa10.67□□□□□ -0.7
CAPN3-207ENST00000397200 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
CAPN3-207ENST00000397200 SCGB3A1Q96QR1 104 aa10.67□□□□□ -0.7
CAPN3-207ENST00000397200 SPXQ9BT56 116 aa10.67□□□□□ -0.7
CAPN3-207ENST00000397200 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
CAPN3-207ENST00000397200 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
CAPN3-207ENST00000397200 KIR2DL4Q99706 377 aa10.66□□□□□ -0.7
CAPN3-207ENST00000397200 MRPL35Q9NZE8 188 aaKnown RBP10.66□□□□□ -0.7
CAPN3-207ENST00000397200 CYSLTR1Q9Y271 337 aa10.66□□□□□ -0.7
CAPN3-207ENST00000397200 F8VRH5 84 aa10.66□□□□□ -0.7
CAPN3-207ENST00000397200 PLNP26678 52 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms