RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ZNF256Q9Y2P7 627 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-206ENST00000397163 IGHV4OR15-8A0A075B7B6 117 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 A0A087WW49 117 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 FAM223BA6NKX1 122 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 IGHV3-11P01762 117 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 POLR2KP53803 58 aaKnown RBP6.87□□□□□ -1.31
CAPN3-206ENST00000397163 LINC00315P59091 139 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 FAM74A4Q5TZK3 123 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 FAM223AQ8IWN6 122 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 TIMM17AQ99595 171 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 COL6A6A6NMZ7 2263 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 IGHV3OR16-10A0A075B7F0 116 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 H3BMM0 161 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 SOCS3O14543 225 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 CEMP1Q6PRD7 247 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-206ENST00000397163 Q6ZSV7 163 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 UBE2WQ96B02 151 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 KIF25-AS1Q9Y6Z4 181 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 NPFFO15130 113 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 ZNF876PQ49A33 203 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 NDUFA4O00483 81 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 LINC01587Q99440 93 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 ZNF580Q9UK33 172 aa6.86□□□□□ -1.31
CAPN3-206ENST00000397163 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
CAPN3-206ENST00000397163 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-206ENST00000397163 POM121L12Q8N7R1 296 aa6.85□□□□□ -1.31
CAPN3-206ENST00000397163 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
CAPN3-206ENST00000397163 OPRPNQ99935 248 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-206ENST00000397163 MOB4Q9Y3A3 225 aa6.85□□□□□ -1.31
CAPN3-206ENST00000397163 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
CAPN3-206ENST00000397163 NXPH4O95158 308 aa6.85□□□□□ -1.31
CAPN3-206ENST00000397163 C2orf82Q6UX34 121 aa6.85□□□□□ -1.31
CAPN3-206ENST00000397163 AMELXQ99217 191 aa6.85□□□□□ -1.31
CAPN3-206ENST00000397163 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.31
CAPN3-206ENST00000397163 RHPN1-AS1Q9BWJ2 59 aa6.84□□□□□ -1.31
CAPN3-206ENST00000397163 ZFYVE26Q68DK2 2539 aa6.84□□□□□ -1.31
CAPN3-206ENST00000397163 AKAP6Q13023 2319 aa6.84□□□□□ -1.31
CAPN3-206ENST00000397163 TRAV12-3A0A0B4J271 114 aa6.84□□□□□ -1.31
CAPN3-206ENST00000397163 CLEC2BQ92478 149 aa6.84□□□□□ -1.31
CAPN3-206ENST00000397163 MDFICQ9P1T7 246 aa6.84□□□□□ -1.31
CAPN3-206ENST00000397163 TRGV11A0A075B6L2 103 aa6.84□□□□□ -1.32
CAPN3-206ENST00000397163 TRIAP1O43715 76 aa6.84□□□□□ -1.32
CAPN3-206ENST00000397163 APRG1Q8IVJ8 170 aa6.84□□□□□ -1.32
CAPN3-206ENST00000397163 FAM208BQ5VWN6 2430 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 MUC4Q99102 2169 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 LEPROTO15243 131 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 PF4V1P10720 104 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 ATXN8Q156A1 80 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 C9orf153Q5TBE3 101 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 TMEM263Q8WUH6 116 aaKnown RBP6.83□□□□□ -1.32
CAPN3-206ENST00000397163 UBTD1Q9HAC8 227 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 LGALS9O00182 355 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 ADORA2A-AS1P86434 159 aa6.83□□□□□ -1.32
CAPN3-206ENST00000397163 ITPR1Q14643 2758 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 TRBV27A0A0K0K1C4 114 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 BPESC1Q9GZL8 116 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 KLLNB2CW77 178 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 Q6Q795 121 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-206ENST00000397163 A0A0B4J2C4 111 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 IGKV3-20P01619 116 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 PRSS2P07478 247 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 LY6EQ16553 131 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 EDA2RQ9HAV5 297 aa6.82□□□□□ -1.32
CAPN3-206ENST00000397163 TRBV6-5A0A0K0K1A5 114 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 A0A1W2PPR1 153 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 C19orf54Q5BKX5 351 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 BRD3OSQ6XYD6 125 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 IGSF10Q6WRI0 2623 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 A0A0J9YXV3 536 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 P0DMU3 169 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 FAM231AP0DMU4 169 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 FAM231CP0DMU5 169 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 LMO4P61968 165 aa6.81□□□□□ -1.32
CAPN3-206ENST00000397163 TRBV10-2A0A0K0K1G8 114 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 H7C423 109 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 RS1O15537 224 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 IGHV1-69P01742 117 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 RHOHQ15669 191 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 USMG5Q96IX5 58 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 M0QY20 66 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 NRGNQ92686 78 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 DAZ1Q9NQZ3 744 aaKnown RBP6.8□□□□□ -1.32
CAPN3-206ENST00000397163 TRAV12-2A0A075B6T6 113 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 TRAV8-3A0A0A6YYJ7 113 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 EDN2P20800 178 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 NSUN5P1Q3KNT7 163 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 SPXQ9BT56 116 aa6.8□□□□□ -1.32
CAPN3-206ENST00000397163 A0A0J9YXY3 114 aa6.79□□□□□ -1.32
CAPN3-206ENST00000397163 HERVK_113P63121 156 aa6.79□□□□□ -1.32
CAPN3-206ENST00000397163 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-206ENST00000397163 C20orf203Q8NBC4 194 aa6.79□□□□□ -1.32
CAPN3-206ENST00000397163 CELSR1Q9NYQ6 3014 aa6.79□□□□□ -1.32
CAPN3-206ENST00000397163 IGHV3-16A0A0C4DH30 117 aa6.79□□□□□ -1.32
CAPN3-206ENST00000397163 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms