RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 FAM159AQ6UWV7 190 aa9.92□□□□□ -0.82
TRIM40-207ENST00000396581 JPT2Q9H910 190 aa9.92□□□□□ -0.82
TRIM40-207ENST00000396581 NBPF19A0A087WUL8 3843 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 J3QQQ9 107 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 EMP1P54849 157 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 NSUN5P1Q3KNT7 163 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 Q6ZUT4 128 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 PTH2Q96A98 100 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 C9orf85Q96MD7 179 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 PRO1854Q9UHT4 67 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 ZANQ9Y493 2812 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 IGHV4-38-2P0DP08 117 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 RHOHQ15669 191 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 BRD3OSQ6XYD6 125 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
TRIM40-207ENST00000396581 A8MWV9 139 aa9.9□□□□□ -0.82
TRIM40-207ENST00000396581 K7EMT4 169 aa9.9□□□□□ -0.82
TRIM40-207ENST00000396581 DCANP1Q8TF63 244 aa9.9□□□□□ -0.82
TRIM40-207ENST00000396581 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.82
TRIM40-207ENST00000396581 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 LEPROTO15243 131 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 AVPP01185 164 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 IGLV1-40P01703 118 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 SPINK8P0C7L1 97 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 XGP55808 180 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 RPL11P62913 178 aaKnown RBP9.89□□□□□ -0.83
TRIM40-207ENST00000396581 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 LINC01600Q96MT4 127 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 A0A087WWL8 130 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 M0QY20 66 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 MT-ATP8P03928 68 aa9.89□□□□□ -0.83
TRIM40-207ENST00000396581 A0A0B4J2C4 111 aa9.88□□□□□ -0.83
TRIM40-207ENST00000396581 IGHV3-16A0A0C4DH30 117 aa9.88□□□□□ -0.83
TRIM40-207ENST00000396581 A0A0J9YX75 114 aa9.88□□□□□ -0.83
TRIM40-207ENST00000396581 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
TRIM40-207ENST00000396581 IGHV3-11P01762 117 aa9.88□□□□□ -0.83
TRIM40-207ENST00000396581 LGALS3P17931 250 aaKnown RBP9.88□□□□□ -0.83
TRIM40-207ENST00000396581 A6NDX4 124 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 J3QLI3 93 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 IGHV3-33P01772 117 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 ZNF688P0C7X2 276 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 ID1P41134 155 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 Q5PR19 223 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 TMEM263Q8WUH6 116 aaKnown RBP9.87□□□□□ -0.83
TRIM40-207ENST00000396581 MDFICQ9P1T7 246 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 CCDC168Q8NDH2 2452 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 P0DMU3 169 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 FAM231AP0DMU4 169 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 FAM231CP0DMU5 169 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 CFHR3Q02985 330 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
TRIM40-207ENST00000396581 GEMIN7Q9H840 131 aaKnown RBP9.87□□□□□ -0.83
TRIM40-207ENST00000396581 A4D1N5 150 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 F5H697 171 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 TGFAP01135 160 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 ZFHX3Q15911 3703 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 IGKV3-7A0A075B6H7 116 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 TMEM262E9PQX1 116 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 PF4V1P10720 104 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
TRIM40-207ENST00000396581 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
TRIM40-207ENST00000396581 KRTAP1-3Q8IUG1 177 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 MAPK1IP1LQ8NDC0 245 aa9.86□□□□□ -0.83
TRIM40-207ENST00000396581 TRAV12-3A0A0B4J271 114 aa9.85□□□□□ -0.83
TRIM40-207ENST00000396581 C20orf203Q8NBC4 194 aa9.85□□□□□ -0.83
TRIM40-207ENST00000396581 ZNF580Q9UK33 172 aa9.85□□□□□ -0.83
TRIM40-207ENST00000396581 ZNF256Q9Y2P7 627 aaPredicted RBP9.85□□□□□ -0.83
TRIM40-207ENST00000396581 UNC79Q9P2D8 2635 aa9.85□□□□□ -0.83
TRIM40-207ENST00000396581 RHODO00212 210 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 RNF152Q8N8N0 203 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 DEFB104AQ8WTQ1 72 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 ITPR2Q14571 2701 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 PRRC2AP48634 2157 aaKnown RBP9.84□□□□□ -0.83
TRIM40-207ENST00000396581 M0R2P5 195 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 SLC25A20O43772 301 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 SCGB1C2P0DMR2 95 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 IGHV4-31P0DP07 118 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 HIST2H2BCQ6DN03 193 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 EDA2RQ9HAV5 297 aa9.84□□□□□ -0.83
TRIM40-207ENST00000396581 TEX15Q9BXT5 2789 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.83□□□□□ -0.84
TRIM40-207ENST00000396581 SRD5A1P18405 259 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 EDN2P20800 178 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 Q96MF0 132 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 OPRPNQ99935 248 aaPredicted RBP9.83□□□□□ -0.84
TRIM40-207ENST00000396581 GCN1Q92616 2671 aaKnown RBP9.83□□□□□ -0.84
TRIM40-207ENST00000396581 BLCAPP62952 87 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 ERG28Q9UKR5 140 aa9.83□□□□□ -0.84
TRIM40-207ENST00000396581 FASNP49327 2511 aaKnown RBP9.82□□□□□ -0.84
TRIM40-207ENST00000396581 ITPR3Q14573 2671 aa9.82□□□□□ -0.84
TRIM40-207ENST00000396581 CR1P17927 2039 aa9.82□□□□□ -0.84
TRIM40-207ENST00000396581 H3BUX3 64 aa9.82□□□□□ -0.84
TRIM40-207ENST00000396581 I3L3M4 83 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms