RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 OR10D4PQ8NGN7 298 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 RHODO00212 210 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 ZNF56Q15929 161 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 OR11H2Q8NH07 326 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 ZNF479Q96JC4 524 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 IGHV3-73A0A0B4J1V6 119 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 AP5S1Q9NUS5 200 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 Q9UF83 564 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 TP53TG1Q9Y2A0 90 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 RIPPLY3P57055 190 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 F5H697 171 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 HSBP1O75506 76 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 MIFP14174 115 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 PMCHP20382 165 aa9.04□□□□□ -0.96
TRIM39-204ENST00000396548 K7EIL1 84 aa9.03□□□□□ -0.96
TRIM39-204ENST00000396548 AMTP48728 403 aa9.03□□□□□ -0.96
TRIM39-204ENST00000396548 FA2HQ7L5A8 372 aa9.03□□□□□ -0.96
TRIM39-204ENST00000396548 TRBV27A0A0K0K1C4 114 aa9.03□□□□□ -0.96
TRIM39-204ENST00000396548 TMEM70Q9BUB7 260 aa9.03□□□□□ -0.96
TRIM39-204ENST00000396548 P0DMU3 169 aa9.02□□□□□ -0.96
TRIM39-204ENST00000396548 FAM231AP0DMU4 169 aa9.02□□□□□ -0.96
TRIM39-204ENST00000396548 FAM231CP0DMU5 169 aa9.02□□□□□ -0.96
TRIM39-204ENST00000396548 KRTAP21-3Q3LHN1 58 aa9.02□□□□□ -0.96
TRIM39-204ENST00000396548 OR4C5Q8NGB2 326 aa9.02□□□□□ -0.96
TRIM39-204ENST00000396548 DNAH9Q9NYC9 4486 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 GAGE12BA1L429 117 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 GAGE7O76087 117 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 GAGE12FP0CL80 117 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 GAGE12GP0CL81 117 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 GAGE12IP0CL82 117 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 CIDEAO60543 219 aa9.02□□□□□ -0.97
TRIM39-204ENST00000396548 LYRM9A8MSI8 78 aa9.01□□□□□ -0.97
TRIM39-204ENST00000396548 K7EMI3 77 aa9.01□□□□□ -0.97
TRIM39-204ENST00000396548 DKK2Q9UBU2 259 aa9.01□□□□□ -0.97
TRIM39-204ENST00000396548 LINC00173Q6ZV60 143 aa9.01□□□□□ -0.97
TRIM39-204ENST00000396548 Q8N976 141 aa9.01□□□□□ -0.97
TRIM39-204ENST00000396548 NEXN-AS1Q8NBZ9 246 aa9.01□□□□□ -0.97
TRIM39-204ENST00000396548 TCAPO15273 167 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 G0S2P27469 103 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 FHL2Q14192 279 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 H7C1H1 209 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 EMP1P54849 157 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 PRB2P02812 416 aaPredicted RBP9□□□□□ -0.97
TRIM39-204ENST00000396548 FCER1GP30273 86 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 LAGE3Q14657 143 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
TRIM39-204ENST00000396548 FAM222AQ5U5X8 452 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 RETNQ9HD89 108 aa9□□□□□ -0.97
TRIM39-204ENST00000396548 NEGR1Q7Z3B1 354 aa8.99□□□□□ -0.97
TRIM39-204ENST00000396548 DNAJC30Q96LL9 226 aa8.99□□□□□ -0.97
TRIM39-204ENST00000396548 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
TRIM39-204ENST00000396548 VCYO14598 125 aa8.99□□□□□ -0.97
TRIM39-204ENST00000396548 DEFB4AO15263 64 aa8.99□□□□□ -0.97
TRIM39-204ENST00000396548 SLC25A29Q8N8R3 303 aa8.99□□□□□ -0.97
TRIM39-204ENST00000396548 HBDP02042 147 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 SBSPONQ8IVN8 264 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 NOTCH1P46531 2555 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 TRGV2A0A075B6R0 118 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 TSHBP01222 138 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 DDTP30046 118 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 K7EQD1 137 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 SPATA12Q7Z6I5 190 aa8.98□□□□□ -0.97
TRIM39-204ENST00000396548 TRBV6-4A0A1B0GX49 114 aa8.97□□□□□ -0.97
TRIM39-204ENST00000396548 LEPROTL1O95214 131 aa8.97□□□□□ -0.97
TRIM39-204ENST00000396548 LINC00694P0DN24 101 aa8.97□□□□□ -0.97
TRIM39-204ENST00000396548 TRBV10-1A0A0K0K1A3 114 aa8.97□□□□□ -0.97
TRIM39-204ENST00000396548 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.97
TRIM39-204ENST00000396548 TM2D3Q9BRN9 247 aa8.96□□□□□ -0.97
TRIM39-204ENST00000396548 C11orf68Q9H3H3 251 aaKnown RBP8.96□□□□□ -0.97
TRIM39-204ENST00000396548 I3L3M4 83 aa8.96□□□□□ -0.98
TRIM39-204ENST00000396548 DEFB130BP0DP73 79 aa8.96□□□□□ -0.98
TRIM39-204ENST00000396548 DEFB130AP0DP74 79 aa8.96□□□□□ -0.98
TRIM39-204ENST00000396548 TOMM6Q96B49 74 aa8.96□□□□□ -0.98
TRIM39-204ENST00000396548 PCP4P48539 62 aa8.95□□□□□ -0.98
TRIM39-204ENST00000396548 TSTD3H0UI37 97 aa8.95□□□□□ -0.98
TRIM39-204ENST00000396548 HSPB8Q9UJY1 196 aa8.95□□□□□ -0.98
TRIM39-204ENST00000396548 TNFRSF18Q9Y5U5 241 aa8.95□□□□□ -0.98
TRIM39-204ENST00000396548 TENM3Q9P273 2699 aa8.95□□□□□ -0.98
TRIM39-204ENST00000396548 TRBV7-3A0A075B6L6 115 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 UBE2D3P61077 147 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 UBE2D2P62837 147 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 SYS1-DBNDD2H3BUS1 97 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 KRTDAPP60985 99 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 RHOHQ15669 191 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
TRIM39-204ENST00000396548 MGAM2Q2M2H8 2515 aa8.93□□□□□ -0.98
TRIM39-204ENST00000396548 LOC100131303A0A0U1RQF7 123 aa8.93□□□□□ -0.98
TRIM39-204ENST00000396548 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
TRIM39-204ENST00000396548 NUDT3O95989 172 aa8.93□□□□□ -0.98
TRIM39-204ENST00000396548 CRYBA4P53673 196 aa8.93□□□□□ -0.98
TRIM39-204ENST00000396548 PKIAP61925 76 aa8.93□□□□□ -0.98
TRIM39-204ENST00000396548 DEFB104AQ8WTQ1 72 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms