RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
CXCL1-201ENST00000395761 SMIM15Q7Z3B0 74 aa11.39□□□□□ -0.59
CXCL1-201ENST00000395761 CBLN2Q8IUK8 224 aa11.39□□□□□ -0.59
CXCL1-201ENST00000395761 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
CXCL1-201ENST00000395761 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
CXCL1-201ENST00000395761 MRPS16Q9Y3D3 137 aaKnown RBP11.39□□□□□ -0.59
CXCL1-201ENST00000395761 RHODO00212 210 aa11.38□□□□□ -0.59
CXCL1-201ENST00000395761 DPH3P1Q9H4G8 78 aa11.38□□□□□ -0.59
CXCL1-201ENST00000395761 Q9H8V8 135 aa11.38□□□□□ -0.59
CXCL1-201ENST00000395761 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
CXCL1-201ENST00000395761 COX19Q49B96 90 aa11.37□□□□□ -0.59
CXCL1-201ENST00000395761 Q6ZR54 194 aa11.37□□□□□ -0.59
CXCL1-201ENST00000395761 UPK3BQ9BT76 320 aa11.37□□□□□ -0.59
CXCL1-201ENST00000395761 DNAH10Q8IVF4 4471 aa11.36□□□□□ -0.59
CXCL1-201ENST00000395761 GAGE12JA6NER3 117 aa11.36□□□□□ -0.59
CXCL1-201ENST00000395761 CAMPP49913 170 aa11.36□□□□□ -0.59
CXCL1-201ENST00000395761 GAGE1Q13065 139 aa11.36□□□□□ -0.59
CXCL1-201ENST00000395761 GAGE4Q13068 117 aa11.36□□□□□ -0.59
CXCL1-201ENST00000395761 GAGE5Q13069 117 aa11.36□□□□□ -0.59
CXCL1-201ENST00000395761 GAGE13Q4V321 117 aa11.36□□□□□ -0.59
CXCL1-201ENST00000395761 TGIF2-C20orf24A0A0A6YYL0 155 aa11.35□□□□□ -0.59
CXCL1-201ENST00000395761 SCO1O75880 301 aa11.35□□□□□ -0.59
CXCL1-201ENST00000395761 RAB4BP61018 213 aa11.35□□□□□ -0.59
CXCL1-201ENST00000395761 FRZBQ92765 325 aa11.35□□□□□ -0.59
CXCL1-201ENST00000395761 GNB1LQ9BYB4 327 aa11.35□□□□□ -0.59
CXCL1-201ENST00000395761 NBDYA0A0U1RRE5 68 aa11.34□□□□□ -0.59
CXCL1-201ENST00000395761 RAB4AP20338 218 aa11.34□□□□□ -0.59
CXCL1-201ENST00000395761 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
CXCL1-201ENST00000395761 TMEM136Q6ZRR5 245 aa11.34□□□□□ -0.59
CXCL1-201ENST00000395761 SH2D6Q7Z4S9 175 aa11.34□□□□□ -0.59
CXCL1-201ENST00000395761 RNF185Q96GF1 192 aa11.34□□□□□ -0.59
CXCL1-201ENST00000395761 DNAH2Q9P225 4427 aa11.33□□□□□ -0.6
CXCL1-201ENST00000395761 LINC00694P0DN24 101 aa11.33□□□□□ -0.6
CXCL1-201ENST00000395761 ZNF56Q15929 161 aa11.33□□□□□ -0.6
CXCL1-201ENST00000395761 COLCA2A8K830 154 aa11.32□□□□□ -0.6
CXCL1-201ENST00000395761 F5H697 171 aa11.32□□□□□ -0.6
CXCL1-201ENST00000395761 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
CXCL1-201ENST00000395761 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
CXCL1-201ENST00000395761 KRTAP1-5Q9BYS1 174 aa11.32□□□□□ -0.6
CXCL1-201ENST00000395761 SIVA1O15304 175 aa11.31□□□□□ -0.6
CXCL1-201ENST00000395761 HLA-DQA1P01909 254 aa11.31□□□□□ -0.6
CXCL1-201ENST00000395761 MT-ND6P03923 174 aa11.31□□□□□ -0.6
CXCL1-201ENST00000395761 TIRAPP58753 221 aa11.31□□□□□ -0.6
CXCL1-201ENST00000395761 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
CXCL1-201ENST00000395761 TRBV10-1A0A0K0K1A3 114 aa11.3□□□□□ -0.6
CXCL1-201ENST00000395761 MGPP08493 103 aa11.3□□□□□ -0.6
CXCL1-201ENST00000395761 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
CXCL1-201ENST00000395761 GTSF1LQ9H1H1 148 aa11.3□□□□□ -0.6
CXCL1-201ENST00000395761 M0QY20 66 aa11.29□□□□□ -0.6
CXCL1-201ENST00000395761 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
CXCL1-201ENST00000395761 NEXN-AS1Q8NBZ9 246 aa11.29□□□□□ -0.6
CXCL1-201ENST00000395761 H7C1H1 209 aa11.28□□□□□ -0.6
CXCL1-201ENST00000395761 RTL8CO15255 209 aa11.28□□□□□ -0.6
CXCL1-201ENST00000395761 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
CXCL1-201ENST00000395761 DNAH17Q9UFH2 4485 aa11.28□□□□□ -0.6
CXCL1-201ENST00000395761 TRBV7-3A0A075B6L6 115 aa11.27□□□□□ -0.61
CXCL1-201ENST00000395761 APCSP02743 223 aa11.27□□□□□ -0.61
CXCL1-201ENST00000395761 PPBPP02775 128 aa11.27□□□□□ -0.61
CXCL1-201ENST00000395761 UBE2D3P61077 147 aa11.27□□□□□ -0.61
CXCL1-201ENST00000395761 UBE2D2P62837 147 aa11.27□□□□□ -0.61
CXCL1-201ENST00000395761 RPL36AP83881 106 aaKnown RBP11.27□□□□□ -0.61
CXCL1-201ENST00000395761 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.61
CXCL1-201ENST00000395761 RPL36ALQ969Q0 106 aaKnown RBP11.27□□□□□ -0.61
CXCL1-201ENST00000395761 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 RAB5AP20339 215 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 OR10J3Q5JRS4 329 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 LELP1Q5T871 98 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 MRPL18Q9H0U6 180 aaKnown RBP11.26□□□□□ -0.61
CXCL1-201ENST00000395761 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
CXCL1-201ENST00000395761 EPPK1P58107 5090 aaKnown RBP11.26□□□□□ -0.61
CXCL1-201ENST00000395761 TRAV8-6A0A0B4J262 113 aa11.25□□□□□ -0.61
CXCL1-201ENST00000395761 TRAV26-2A0A0B4J265 109 aa11.25□□□□□ -0.61
CXCL1-201ENST00000395761 PPP1R17O96001 155 aa11.25□□□□□ -0.61
CXCL1-201ENST00000395761 TTC32Q5I0X7 151 aa11.25□□□□□ -0.61
CXCL1-201ENST00000395761 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
CXCL1-201ENST00000395761 TRBV6-5A0A0K0K1A5 114 aa11.24□□□□□ -0.61
CXCL1-201ENST00000395761 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
CXCL1-201ENST00000395761 CKS2P33552 79 aa11.24□□□□□ -0.61
CXCL1-201ENST00000395761 FABP9Q0Z7S8 132 aa11.24□□□□□ -0.61
CXCL1-201ENST00000395761 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
CXCL1-201ENST00000395761 C6orf223Q8N319 242 aa11.24□□□□□ -0.61
CXCL1-201ENST00000395761 D6R8Y8 96 aa11.23□□□□□ -0.61
CXCL1-201ENST00000395761 PHOX2AO14813 284 aa11.23□□□□□ -0.61
CXCL1-201ENST00000395761 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
CXCL1-201ENST00000395761 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
CXCL1-201ENST00000395761 NRACQ8N912 160 aa11.23□□□□□ -0.61
CXCL1-201ENST00000395761 LAMTOR2Q9Y2Q5 125 aa11.23□□□□□ -0.61
CXCL1-201ENST00000395761 SMKR1H3BMG3 65 aa11.22□□□□□ -0.61
CXCL1-201ENST00000395761 Q8N3U1 123 aa11.22□□□□□ -0.61
CXCL1-201ENST00000395761 TNFRSF18Q9Y5U5 241 aa11.22□□□□□ -0.61
CXCL1-201ENST00000395761 FAT2Q9NYQ8 4349 aa11.22□□□□□ -0.61
CXCL1-201ENST00000395761 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
CXCL1-201ENST00000395761 KIAA1644Q3SXP7 199 aa11.21□□□□□ -0.61
CXCL1-201ENST00000395761 LINC00336Q6ZUF6 198 aa11.21□□□□□ -0.61
CXCL1-201ENST00000395761 RPL39LQ96EH5 51 aaKnown RBP11.21□□□□□ -0.61
CXCL1-201ENST00000395761 PRELID3AQ96N28 172 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms