RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 TRAV9-1A0A075B6T8 112 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 A0A096LPF7 62 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 TMEM223A0PJW6 202 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 A8MUN3 132 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 J3KT08 172 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 J3QRK9 145 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 K7ERS5 55 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 HLA-DQB1P01920 261 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 ELK1P19419 428 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 ATP6V0CP27449 155 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 EIF2B2P49770 351 aaKnown RBP3.31□□□□□ -1.88
AP3S1-202ENST00000395548 TNFAIP8L3Q5GJ75 292 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 PSMG4Q5JS54 123 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 Q6Q795 121 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 NTM-AS1Q6ZSK4 140 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 VPS25Q9BRG1 176 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 SEC22CQ9BRL7 303 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 SHANK2-AS3Q9BTD1 123 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 TSSK6Q9BXA6 273 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 CMC2Q9NRP2 79 aa3.31□□□□□ -1.88
AP3S1-202ENST00000395548 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
AP3S1-202ENST00000395548 BORCS7-ASMTA0A0B4J1R7 106 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 ZNF324O75467 553 aaPredicted RBP3.3□□□□□ -1.88
AP3S1-202ENST00000395548 HLA-DRB4P13762 266 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 CRHBPP24387 322 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 RPL27AP46776 148 aaKnown RBP3.3□□□□□ -1.88
AP3S1-202ENST00000395548 RBM11P57052 281 aaKnown RBP3.3□□□□□ -1.88
AP3S1-202ENST00000395548 TAS2R45P59539 299 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 KISS1Q15726 138 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 ZFP1Q6P2D0 407 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 IDO2Q6ZQW0 420 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 CROCCP2Q86T23 111 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 EXOC3-AS1Q8N2X6 119 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 C12orf45Q8N5I9 185 aaPredicted RBP3.3□□□□□ -1.88
AP3S1-202ENST00000395548 TMEM126AQ9H061 195 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 TIMM8BQ9Y5J9 83 aaPredicted RBP3.3□□□□□ -1.88
AP3S1-202ENST00000395548 HLA-DRB4X5D2U9 266 aa3.3□□□□□ -1.88
AP3S1-202ENST00000395548 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
AP3S1-202ENST00000395548 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
AP3S1-202ENST00000395548 GEMIN2O14893 280 aaKnown RBP3.29□□□□□ -1.88
AP3S1-202ENST00000395548 PTHLHP12272 177 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 OPRK1P41145 380 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 PIGPP57054 158 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 FXYD7P58549 80 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 RPS28P62857 69 aaKnown RBP3.29□□□□□ -1.88
AP3S1-202ENST00000395548 DHRS2Q13268 280 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 C10orf55Q5SWW7 151 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 LYRM7Q5U5X0 104 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 SPINK6Q6UWN8 80 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 AMN1Q8IY45 258 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.29□□□□□ -1.88
AP3S1-202ENST00000395548 DCANP1Q8TF63 244 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 ADAT3Q96EY9 351 aaPredicted RBP3.29□□□□□ -1.88
AP3S1-202ENST00000395548 LAMTOR3Q9UHA4 124 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
AP3S1-202ENST00000395548 A0A087WX48 190 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 LOC107986453A0A1B0GWG9 222 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 A0A1B0GX51 115 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 ZNF98A6NK75 572 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 BCL2L11O43521 198 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 SRP19P09132 144 aaKnown RBP3.28□□□□□ -1.88
AP3S1-202ENST00000395548 OR5AC1P0C628 307 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 AKR1C2P52895 323 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 SP6Q3SY56 376 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 Q56UQ5 140 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 VSTM2AQ8TAG5 236 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 TMEM167AQ8TBQ9 72 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 SLC25A46Q96AG3 418 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 TOMM6Q96B49 74 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
AP3S1-202ENST00000395548 IMUPQ9GZP8 106 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 PSORS1C2Q9UIG4 136 aa3.28□□□□□ -1.88
AP3S1-202ENST00000395548 IGHV3-21A0A0B4J1V1 117 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 A0A1B0GV90 55 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 DUXBA0A1W2PPF3 345 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 LINC00587B1AMM8 73 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 IBA57-AS1B1ANH7 110 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 BET1O15155 118 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 PLA2G10O15496 165 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 HRASP01112 189 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 KRASP01116 189 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 CTSGP08311 255 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 RPL7P18124 248 aaKnown RBP3.27□□□□□ -1.89
AP3S1-202ENST00000395548 SNRPGP62308 76 aaKnown RBP3.27□□□□□ -1.89
AP3S1-202ENST00000395548 PSG9Q00887 426 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 INSL4Q14641 139 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 WHAMMP3Q1A5X7 153 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 TMEM244Q5VVB8 128 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 FAM104BQ5XKR9 115 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 ZNF322Q6U7Q0 402 aaPredicted RBP3.27□□□□□ -1.89
AP3S1-202ENST00000395548 LYPD5Q6UWN5 251 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 H1FOOQ8IZA3 346 aaPredicted RBP3.27□□□□□ -1.89
AP3S1-202ENST00000395548 ZNF709Q8N972 641 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 NUP35Q8NFH5 326 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 OR8D4Q8NGM9 314 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 C2orf50Q96LR7 162 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 S100A13Q99584 98 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 VCXQ9H320 206 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms