RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 C10orf105Q8TEF2 133 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 GPR179Q6PRD1 2367 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 ANKRD39Q53RE8 183 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 GNRH2O43555 120 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 CRIPAKQ8N1N5 446 aa5.78□□□□□ -1.48
SYNE2-205ENST00000394768 FAM215AQ9Y5M1 114 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 IGLV11-55A0A075B6I3 123 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 Q6ZR03 302 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 TOMM6Q96B49 74 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 CRYGDP07320 174 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 LINC00322Q6ZN03 302 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-205ENST00000394768 NOTCH4Q99466 2003 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 A0A0G2JRQ6 117 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 HIGD1BQ9P298 99 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 PRB4P10163 310 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-205ENST00000394768 MLANAQ16655 118 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 TCL1BO95988 128 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 C3orf22Q8N5N4 141 aa5.77□□□□□ -1.49
SYNE2-205ENST00000394768 MYO9AB2RTY4 2548 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 IGKV1-6A0A0C4DH72 117 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 RNF144BQ7Z419 303 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 ZFHX2Q9C0A1 2572 aaPredicted RBP5.76□□□□□ -1.49
SYNE2-205ENST00000394768 A0A087WZ39 114 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 MUC7Q8TAX7 377 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 FAM110AQ9BQ89 295 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 ZNF747Q9BV97 191 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 LRRK2Q5S007 2527 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 IGHV7-81A0A0B4J1V7 117 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 UBE2D3P61077 147 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 NCR3O14931 201 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 LECT2O14960 151 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 MIFP14174 115 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 IGLL1P15814 213 aa5.76□□□□□ -1.49
SYNE2-205ENST00000394768 K7ERJ3 54 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 AJUBAQ96IF1 538 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 GATA1P15976 413 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-205ENST00000394768 ODF1Q14990 250 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 TPSG1Q9NRR2 321 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 ZNRD1Q9P1U0 126 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 WDR86Q86TI4 376 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 A0A087WV48 116 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 SPATA12Q7Z6I5 190 aa5.75□□□□□ -1.49
SYNE2-205ENST00000394768 IGHV4-61A0A0C4DH41 118 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 DHRS4-AS1Q9P1J3 65 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 IGHV4-30-2A0A087WSY4 118 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 TTC28Q96AY4 2481 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 IGHV4OR15-8A0A075B7B6 117 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 A0A087WW49 117 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 CRYGBP07316 175 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 LINC00205P59089 165 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 MIAQ16674 131 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 IGFL2Q6UWQ7 119 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 HIST2H2BDQ6DRA6 164 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 MDFICQ9P1T7 246 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 ATG2AQ2TAZ0 1938 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 TECTAO75443 2155 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 REG3AQ06141 175 aa5.74□□□□□ -1.49
SYNE2-205ENST00000394768 E9PLD3 99 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 CTRLP40313 264 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 HIGD2AQ9BW72 106 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 IGHV4-38-2P0DP08 117 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 PCDH15Q96QU1 1955 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 TRBV6-1A0A0K0K1D8 114 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 I3L2K1 104 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 P0DMU3 169 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 FAM231AP0DMU4 169 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 FAM231CP0DMU5 169 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 MIR7-3HGQ8N6C7 128 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 TDRG1Q3Y452 100 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 RPL39LQ96EH5 51 aaKnown RBP5.73□□□□□ -1.49
SYNE2-205ENST00000394768 CCDC140Q96MF4 163 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 TRAV10A0A0B4J240 114 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 PRR31Q5SQ13 230 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 ZFAND2AQ8N6M9 145 aa5.73□□□□□ -1.49
SYNE2-205ENST00000394768 IGKV2-24A0A0C4DH68 120 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 CTSGP08311 255 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 LINC00643Q86TS7 51 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 FBXL19-AS1Q494R0 122 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 PTPRSQ13332 1948 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 FSHBP01225 129 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 NPSP0C0P6 89 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 DEFB131BA0A096LNP1 70 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 DNAJC9-AS1A6NH13 148 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 PRYO14603 147 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 K7EIM0 57 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 IGKV2D-26A0A0A0MRZ7 120 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 WI2-2373I1.2A0A1W2PRP0 233 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 LRCOL1A6NCL2 159 aa5.72□□□□□ -1.49
SYNE2-205ENST00000394768 FAM19A1Q7Z5A9 133 aa5.71□□□□□ -1.49
SYNE2-205ENST00000394768 IGKV3D-7A0A0C4DH55 119 aa5.71□□□□□ -1.49
SYNE2-205ENST00000394768 IBA57-AS1B1ANH7 110 aa5.71□□□□□ -1.5
SYNE2-205ENST00000394768 ZFYVE26Q68DK2 2539 aa5.71□□□□□ -1.5
SYNE2-205ENST00000394768 FOXI1Q12951 378 aa5.71□□□□□ -1.5
SYNE2-205ENST00000394768 TRAV26-1A0A087WT03 109 aa5.71□□□□□ -1.5
SYNE2-205ENST00000394768 A0A0J9YXV3 536 aa5.71□□□□□ -1.5
SYNE2-205ENST00000394768 DIAPH2-AS1Q14236 149 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms