RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 H3BUX3 64 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 EDN2P20800 178 aa11.65□□□□□ -0.54
PTBP1-204ENST00000394601 ELANEP08246 267 aa11.65□□□□□ -0.55
PTBP1-204ENST00000394601 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.55
PTBP1-204ENST00000394601 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 A0A0U1RRA0 63 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 Q8N1Y9 231 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 USMG5Q96IX5 58 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 SMIM2Q9BVW6 85 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 PHLDA3Q9Y5J5 127 aa11.64□□□□□ -0.55
PTBP1-204ENST00000394601 IGHV3-11P01762 117 aa11.63□□□□□ -0.55
PTBP1-204ENST00000394601 Q6ZSV7 163 aa11.63□□□□□ -0.55
PTBP1-204ENST00000394601 LGALS3P17931 250 aaKnown RBP11.63□□□□□ -0.55
PTBP1-204ENST00000394601 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
PTBP1-204ENST00000394601 MUC4Q99102 2169 aa11.62□□□□□ -0.55
PTBP1-204ENST00000394601 LINC00477Q96M19 166 aa11.62□□□□□ -0.55
PTBP1-204ENST00000394601 A0A087WWL8 130 aa11.62□□□□□ -0.55
PTBP1-204ENST00000394601 MSMBP08118 114 aa11.62□□□□□ -0.55
PTBP1-204ENST00000394601 TP53TG1Q9Y2A0 90 aa11.62□□□□□ -0.55
PTBP1-204ENST00000394601 F6UB75 175 aa11.61□□□□□ -0.55
PTBP1-204ENST00000394601 C10orf126Q8N4M7 172 aa11.61□□□□□ -0.55
PTBP1-204ENST00000394601 A0A096LNT2 108 aa11.61□□□□□ -0.55
PTBP1-204ENST00000394601 JPT2Q9H910 190 aa11.61□□□□□ -0.55
PTBP1-204ENST00000394601 RHODO00212 210 aa11.61□□□□□ -0.55
PTBP1-204ENST00000394601 TSPEAR-AS2P59090 65 aa11.61□□□□□ -0.55
PTBP1-204ENST00000394601 ATP6V0E2Q8NHE4 81 aa11.61□□□□□ -0.55
PTBP1-204ENST00000394601 LOC107984640A0A0U1RRK4 108 aa11.6□□□□□ -0.55
PTBP1-204ENST00000394601 ATP5J2P56134 94 aa11.6□□□□□ -0.55
PTBP1-204ENST00000394601 C2orf82Q6UX34 121 aa11.6□□□□□ -0.55
PTBP1-204ENST00000394601 ZNF580Q9UK33 172 aa11.6□□□□□ -0.55
PTBP1-204ENST00000394601 UBR5O95071 2799 aaPredicted RBP11.6□□□□□ -0.55
PTBP1-204ENST00000394601 A0A0J9YY99 117 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 M0QXV9 152 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 CD7P09564 240 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 SRD5A1P18405 259 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 CENPEQ02224 2701 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 OVOL1O14753 267 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
PTBP1-204ENST00000394601 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
PTBP1-204ENST00000394601 NRGNQ92686 78 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 KLK5Q9Y337 293 aaPredicted RBP11.59□□□□□ -0.55
PTBP1-204ENST00000394601 UBE2D1P51668 147 aa11.59□□□□□ -0.55
PTBP1-204ENST00000394601 GNRH2O43555 120 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 IGKV3-20P01619 116 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 UBE2D3P61077 147 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 UBE2D2P62837 147 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 POM121L12Q8N7R1 296 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 RHPN1-AS1Q9BWJ2 59 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 DCANP1Q8TF63 244 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 CLEC2BQ92478 149 aa11.58□□□□□ -0.56
PTBP1-204ENST00000394601 WNK1Q9H4A3 2382 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 TRAV8-3A0A0A6YYJ7 113 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 HTN1P15515 57 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 PSMB8P28062 276 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
PTBP1-204ENST00000394601 ORMDL2Q53FV1 153 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 PF4V1P10720 104 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 LINC00315P59091 139 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 C10orf99Q6UWK7 81 aa11.57□□□□□ -0.56
PTBP1-204ENST00000394601 TRAV21A0A0B4J279 112 aa11.56□□□□□ -0.56
PTBP1-204ENST00000394601 KLLNB2CW77 178 aa11.56□□□□□ -0.56
PTBP1-204ENST00000394601 NXPH4O95158 308 aa11.56□□□□□ -0.56
PTBP1-204ENST00000394601 KIF25-AS1Q9Y6Z4 181 aa11.56□□□□□ -0.56
PTBP1-204ENST00000394601 SONP18583 2426 aaKnown RBP11.56□□□□□ -0.56
PTBP1-204ENST00000394601 DAND5Q8N907 189 aa11.56□□□□□ -0.56
PTBP1-204ENST00000394601 OR10J6PQ8NGY7 276 aa11.56□□□□□ -0.56
PTBP1-204ENST00000394601 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
PTBP1-204ENST00000394601 MED14OSP0DP75 135 aa11.55□□□□□ -0.56
PTBP1-204ENST00000394601 SPXQ9BT56 116 aa11.55□□□□□ -0.56
PTBP1-204ENST00000394601 MYO18BQ8IUG5 2567 aa11.55□□□□□ -0.56
PTBP1-204ENST00000394601 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
PTBP1-204ENST00000394601 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
PTBP1-204ENST00000394601 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
PTBP1-204ENST00000394601 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
PTBP1-204ENST00000394601 H3BMM0 161 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 J3QQQ9 107 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 K7EMT4 169 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
PTBP1-204ENST00000394601 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 UBE2WQ96B02 151 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 B4DSR2 109 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 VCX2Q9H322 139 aa11.54□□□□□ -0.56
PTBP1-204ENST00000394601 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
PTBP1-204ENST00000394601 IGHV4-59P01825 116 aa11.53□□□□□ -0.56
PTBP1-204ENST00000394601 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
PTBP1-204ENST00000394601 TRGV11A0A075B6L2 103 aa11.53□□□□□ -0.56
PTBP1-204ENST00000394601 A8MZ25 164 aa11.53□□□□□ -0.56
PTBP1-204ENST00000394601 ANKRD17O75179 2603 aaKnown RBP11.52□□□□□ -0.56
PTBP1-204ENST00000394601 USP24Q9UPU5 2620 aa11.52□□□□□ -0.56
PTBP1-204ENST00000394601 DEFB112Q30KQ8 113 aa11.52□□□□□ -0.57
PTBP1-204ENST00000394601 TOMM6Q96B49 74 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms