RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 NDUFA11Q86Y39 141 aa12.54□□□□□ -0.4
SIPA1-201ENST00000394224 ELANEP08246 267 aa12.54□□□□□ -0.4
SIPA1-201ENST00000394224 PRO0461Q9UI25 63 aa12.54□□□□□ -0.4
SIPA1-201ENST00000394224 A0A0J9YY99 117 aa12.54□□□□□ -0.4
SIPA1-201ENST00000394224 PMVKQ15126 192 aa12.54□□□□□ -0.4
SIPA1-201ENST00000394224 C11orf71Q6IPW1 123 aa12.54□□□□□ -0.4
SIPA1-201ENST00000394224 Q8N1Y9 231 aa12.54□□□□□ -0.4
SIPA1-201ENST00000394224 CRYBA4P53673 196 aa12.53□□□□□ -0.4
SIPA1-201ENST00000394224 A8MWV9 139 aa12.53□□□□□ -0.4
SIPA1-201ENST00000394224 C1QTNF4Q9BXJ3 329 aa12.53□□□□□ -0.4
SIPA1-201ENST00000394224 COX8CQ7Z4L0 72 aa12.52□□□□□ -0.4
SIPA1-201ENST00000394224 MUSTN1Q8IVN3 82 aa12.52□□□□□ -0.4
SIPA1-201ENST00000394224 IGLV4-69A0A075B6H9 119 aa12.52□□□□□ -0.41
SIPA1-201ENST00000394224 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
SIPA1-201ENST00000394224 SS18L2Q9UHA2 77 aa12.52□□□□□ -0.41
SIPA1-201ENST00000394224 GNLYP22749 145 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 NTN5Q8WTR8 489 aaPredicted RBP12.51□□□□□ -0.41
SIPA1-201ENST00000394224 CARD19Q96LW7 228 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 ATP5J2P56134 94 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 RNF183Q96D59 192 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 PSMG3-AS1Q96PY0 264 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 EBI3Q14213 229 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 VCX2Q9H322 139 aa12.51□□□□□ -0.41
SIPA1-201ENST00000394224 RNF223E7ERA6 249 aa12.5□□□□□ -0.41
SIPA1-201ENST00000394224 OVOL1O14753 267 aa12.5□□□□□ -0.41
SIPA1-201ENST00000394224 TEX49A0A1B0GTD5 131 aa12.49□□□□□ -0.41
SIPA1-201ENST00000394224 VCYO14598 125 aa12.49□□□□□ -0.41
SIPA1-201ENST00000394224 KLRB1Q12918 225 aa12.49□□□□□ -0.41
SIPA1-201ENST00000394224 DAZ1Q9NQZ3 744 aaKnown RBP12.49□□□□□ -0.41
SIPA1-201ENST00000394224 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
SIPA1-201ENST00000394224 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
SIPA1-201ENST00000394224 IGSF10Q6WRI0 2623 aa12.49□□□□□ -0.41
SIPA1-201ENST00000394224 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.49□□□□□ -0.41
SIPA1-201ENST00000394224 IGKV2-29A2NJV5 120 aaPredicted RBP12.49□□□□□ -0.41
SIPA1-201ENST00000394224 CDIP1Q9H305 208 aa12.49□□□□□ -0.41
SIPA1-201ENST00000394224 CD28P10747 220 aa12.49□□□□□ -0.41
SIPA1-201ENST00000394224 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
SIPA1-201ENST00000394224 Q6ZUT4 128 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 PIFOQ8TCI5 191 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 DOPEY1Q5JWR5 2465 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 TRAV12-1A0A0B4J245 112 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 IGHV1-69DA0A0B4J2H0 117 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 OOSP1A8MZH6 123 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 SLC25A20O43772 301 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 AVPP01185 164 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 IGHV1-69P01742 117 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 IGHV4-59P01825 116 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 ANAPC13Q9BS18 74 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 ERG28Q9UKR5 140 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 TAL2Q16559 108 aa12.48□□□□□ -0.41
SIPA1-201ENST00000394224 CLEC2BQ92478 149 aa12.47□□□□□ -0.41
SIPA1-201ENST00000394224 B5MCH6 92 aa12.47□□□□□ -0.41
SIPA1-201ENST00000394224 IGHV3-53P01767 116 aa12.47□□□□□ -0.41
SIPA1-201ENST00000394224 IGHV4-30-2A0A087WSY4 118 aa12.47□□□□□ -0.41
SIPA1-201ENST00000394224 C10orf126Q8N4M7 172 aa12.45□□□□□ -0.42
SIPA1-201ENST00000394224 IGIPA6NJ69 53 aa12.45□□□□□ -0.42
SIPA1-201ENST00000394224 IGHV3-30P01768 117 aa12.45□□□□□ -0.42
SIPA1-201ENST00000394224 IGHV3-30-5P0DP03 117 aa12.45□□□□□ -0.42
SIPA1-201ENST00000394224 NDUFA4O00483 81 aa12.45□□□□□ -0.42
SIPA1-201ENST00000394224 COX6B1P14854 86 aa12.44□□□□□ -0.42
SIPA1-201ENST00000394224 SRSF2Q01130 221 aaKnown RBP12.44□□□□□ -0.42
SIPA1-201ENST00000394224 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
SIPA1-201ENST00000394224 SPATA25Q9BR10 227 aa12.44□□□□□ -0.42
SIPA1-201ENST00000394224 CRLF1O75462 422 aa12.44□□□□□ -0.42
SIPA1-201ENST00000394224 U3KQE9 123 aa12.44□□□□□ -0.42
SIPA1-201ENST00000394224 ID1P41134 155 aa12.43□□□□□ -0.42
SIPA1-201ENST00000394224 LINC00315P59091 139 aa12.43□□□□□ -0.42
SIPA1-201ENST00000394224 C18orf65Q6ZTR6 163 aa12.43□□□□□ -0.42
SIPA1-201ENST00000394224 TEN1Q86WV5 123 aa12.43□□□□□ -0.42
SIPA1-201ENST00000394224 UBE2D1P51668 147 aa12.43□□□□□ -0.42
SIPA1-201ENST00000394224 PPDPFLQ8WWR9 84 aa12.43□□□□□ -0.42
SIPA1-201ENST00000394224 TMEM190Q8WZ59 177 aa12.43□□□□□ -0.42
SIPA1-201ENST00000394224 LINC01546A6NGU7 62 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 RS1O15537 224 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 APRG1Q8IVJ8 170 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 CCL19Q99731 98 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 NDUFA7O95182 113 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 DEFB131AP59861 70 aa12.42□□□□□ -0.42
SIPA1-201ENST00000394224 TRAV4A0A0B4J268 109 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 EIF4EBP3O60516 100 aaPredicted RBP12.41□□□□□ -0.42
SIPA1-201ENST00000394224 TEX29Q8N6K0 151 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 UBE2E2Q96LR5 201 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 IGHV4-4A0A075B6R2 117 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 A0A1W2PRX2 142 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
SIPA1-201ENST00000394224 SNRPD3P62318 126 aaKnown RBP12.41□□□□□ -0.42
SIPA1-201ENST00000394224 SOCS3O14543 225 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 DGAT2L7PQ6IED9 249 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 SLC25A29Q8N8R3 303 aa12.41□□□□□ -0.42
SIPA1-201ENST00000394224 ADAMTSL4-AS1Q5T5F5 129 aa12.39□□□□□ -0.43
SIPA1-201ENST00000394224 TIMM21Q9BVV7 248 aa12.39□□□□□ -0.43
SIPA1-201ENST00000394224 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
SIPA1-201ENST00000394224 SNCGO76070 127 aa12.39□□□□□ -0.43
SIPA1-201ENST00000394224 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
SIPA1-201ENST00000394224 M0QY20 66 aa12.39□□□□□ -0.43
SIPA1-201ENST00000394224 ZNF22P17026 224 aaPredicted RBP12.39□□□□□ -0.43
SIPA1-201ENST00000394224 TRAV13-1A0A0B4J241 112 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms