RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 Q6ZSV7 163 aa8.56□□□□□ -1.04
LAMB1-203ENST00000393560 C6orf223Q8N319 242 aa8.56□□□□□ -1.04
LAMB1-203ENST00000393560 FDCSPQ8NFU4 85 aa8.56□□□□□ -1.04
LAMB1-203ENST00000393560 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
LAMB1-203ENST00000393560 CACNA1BQ00975 2339 aa8.56□□□□□ -1.04
LAMB1-203ENST00000393560 ZZEF1O43149 2961 aa8.56□□□□□ -1.04
LAMB1-203ENST00000393560 COL12A1Q99715 3063 aa8.55□□□□□ -1.04
LAMB1-203ENST00000393560 KLF14Q8TD94 323 aaPredicted RBP8.55□□□□□ -1.04
LAMB1-203ENST00000393560 ANKRD11Q6UB99 2663 aaPredicted RBP8.55□□□□□ -1.04
LAMB1-203ENST00000393560 GRNP28799 593 aaKnown RBP8.55□□□□□ -1.04
LAMB1-203ENST00000393560 MRPS36P82909 103 aaKnown RBP8.55□□□□□ -1.04
LAMB1-203ENST00000393560 C8orf49Q96NF6 230 aa8.55□□□□□ -1.04
LAMB1-203ENST00000393560 ARHGAP32A7KAX9 2087 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 PLAC8L1A1L4L8 177 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 RPL39P5Q59GN2 51 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 NAV3Q8IVL0 2385 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 TRAV23DV6A0A075B6W5 121 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 IGHV3OR16-10A0A075B7F0 116 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 I3L3M4 83 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 DAD1P61803 113 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 DEFB109BQ30KR1 87 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 Q8NA96 180 aa8.54□□□□□ -1.04
LAMB1-203ENST00000393560 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
LAMB1-203ENST00000393560 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
LAMB1-203ENST00000393560 PRRC2AP48634 2157 aaKnown RBP8.53□□□□□ -1.04
LAMB1-203ENST00000393560 FAM216BQ8N7L0 139 aa8.53□□□□□ -1.04
LAMB1-203ENST00000393560 SPRR3Q9UBC9 169 aa8.53□□□□□ -1.04
LAMB1-203ENST00000393560 CUBNO60494 3623 aa8.53□□□□□ -1.04
LAMB1-203ENST00000393560 CFHR3Q02985 330 aa8.53□□□□□ -1.04
LAMB1-203ENST00000393560 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.53□□□□□ -1.04
LAMB1-203ENST00000393560 DAND5Q8N907 189 aa8.53□□□□□ -1.04
LAMB1-203ENST00000393560 C11orf68Q9H3H3 251 aaKnown RBP8.53□□□□□ -1.04
LAMB1-203ENST00000393560 PROP1O75360 226 aa8.52□□□□□ -1.05
LAMB1-203ENST00000393560 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
LAMB1-203ENST00000393560 PRB3Q04118 309 aaPredicted RBP8.52□□□□□ -1.05
LAMB1-203ENST00000393560 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.05
LAMB1-203ENST00000393560 F8WEM9 126 aa8.52□□□□□ -1.05
LAMB1-203ENST00000393560 M0R1W7 72 aa8.52□□□□□ -1.05
LAMB1-203ENST00000393560 Q6JHZ5 121 aa8.52□□□□□ -1.05
LAMB1-203ENST00000393560 ZNF71Q9NQZ8 489 aaPredicted RBP8.52□□□□□ -1.05
LAMB1-203ENST00000393560 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
LAMB1-203ENST00000393560 SNURFQ9Y675 71 aa8.52□□□□□ -1.05
LAMB1-203ENST00000393560 TMEM14BQ9NUH8 114 aa8.51□□□□□ -1.05
LAMB1-203ENST00000393560 MAP1AP78559 2803 aaPredicted RBP8.51□□□□□ -1.05
LAMB1-203ENST00000393560 APELAP0DMC3 54 aa8.51□□□□□ -1.05
LAMB1-203ENST00000393560 INAFM2P0DMQ5 153 aa8.51□□□□□ -1.05
LAMB1-203ENST00000393560 C1orf229Q6ZS94 237 aaPredicted RBP8.51□□□□□ -1.05
LAMB1-203ENST00000393560 CNEP1R1Q8N9A8 125 aa8.51□□□□□ -1.05
LAMB1-203ENST00000393560 AMELXQ99217 191 aa8.51□□□□□ -1.05
LAMB1-203ENST00000393560 IGKV3D-15A0A087WSY6 115 aa8.5□□□□□ -1.05
LAMB1-203ENST00000393560 GP9P14770 177 aa8.5□□□□□ -1.05
LAMB1-203ENST00000393560 DEFB108BQ8NET1 73 aa8.5□□□□□ -1.05
LAMB1-203ENST00000393560 DSCAMO60469 2012 aa8.5□□□□□ -1.05
LAMB1-203ENST00000393560 ZNRF1Q8ND25 227 aa8.5□□□□□ -1.05
LAMB1-203ENST00000393560 K7EMT4 169 aa8.49□□□□□ -1.05
LAMB1-203ENST00000393560 ZNF491Q8N8L2 437 aa8.49□□□□□ -1.05
LAMB1-203ENST00000393560 A0A087WZ39 114 aa8.49□□□□□ -1.05
LAMB1-203ENST00000393560 C11orf44Q8N8P7 122 aa8.49□□□□□ -1.05
LAMB1-203ENST00000393560 RMI2Q96E14 147 aa8.49□□□□□ -1.05
LAMB1-203ENST00000393560 SPTBN4Q9H254 2564 aa8.49□□□□□ -1.05
LAMB1-203ENST00000393560 IGF1P05019 195 aa8.48□□□□□ -1.05
LAMB1-203ENST00000393560 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
LAMB1-203ENST00000393560 UNQ9165/PRO28630Q6UXU0 137 aa8.48□□□□□ -1.05
LAMB1-203ENST00000393560 BAALC-AS2P0C853 105 aa8.48□□□□□ -1.05
LAMB1-203ENST00000393560 WFDC9Q8NEX5 89 aa8.48□□□□□ -1.05
LAMB1-203ENST00000393560 DCHS2Q6V1P9 2916 aa8.48□□□□□ -1.05
LAMB1-203ENST00000393560 DNAL4O96015 105 aa8.48□□□□□ -1.05
LAMB1-203ENST00000393560 EGR2P11161 476 aaPredicted RBP8.48□□□□□ -1.05
LAMB1-203ENST00000393560 TOMM6Q96B49 74 aa8.48□□□□□ -1.05
LAMB1-203ENST00000393560 AKAP6Q13023 2319 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 RAI1Q7Z5J4 1906 aaPredicted RBP8.47□□□□□ -1.05
LAMB1-203ENST00000393560 NDPQ00604 133 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 TMEM75Q8N9X5 138 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 ZFHX3Q15911 3703 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 SPTA1P02549 2419 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 IGF2RP11717 2491 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 IGKV1D-37A0A075B6S9 117 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 IGHV3-21A0A0B4J1V1 117 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 J3QT63 122 aa8.47□□□□□ -1.05
LAMB1-203ENST00000393560 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.05
LAMB1-203ENST00000393560 Q8N2B8 174 aa8.46□□□□□ -1.05
LAMB1-203ENST00000393560 LAMTOR3Q9UHA4 124 aa8.46□□□□□ -1.05
LAMB1-203ENST00000393560 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
LAMB1-203ENST00000393560 PRCDQ00LT1 54 aa8.46□□□□□ -1.06
LAMB1-203ENST00000393560 C2orf66Q6UXQ4 117 aa8.46□□□□□ -1.06
LAMB1-203ENST00000393560 TMEM190Q8WZ59 177 aa8.46□□□□□ -1.06
LAMB1-203ENST00000393560 MRPL36Q9P0J6 103 aaKnown RBP8.46□□□□□ -1.06
LAMB1-203ENST00000393560 TRBV6-1A0A0K0K1D8 114 aa8.45□□□□□ -1.06
LAMB1-203ENST00000393560 TRGV3P03979 118 aa8.45□□□□□ -1.06
LAMB1-203ENST00000393560 NXPH4O95158 308 aa8.45□□□□□ -1.06
LAMB1-203ENST00000393560 TM2D3Q9BRN9 247 aa8.45□□□□□ -1.06
LAMB1-203ENST00000393560 WNK2Q9Y3S1 2297 aa8.45□□□□□ -1.06
LAMB1-203ENST00000393560 M0R1B8 84 aa8.44□□□□□ -1.06
LAMB1-203ENST00000393560 ABCA4P78363 2273 aa8.44□□□□□ -1.06
LAMB1-203ENST00000393560 BSNQ9UPA5 3926 aa8.44□□□□□ -1.06
LAMB1-203ENST00000393560 TRBV12-3P01733 135 aa8.44□□□□□ -1.06
LAMB1-203ENST00000393560 CD40P25942 277 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms