RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 IGHV3-38A0A0C4DH36 116 aa12.94□□□□□ -0.34
PDLIM7-204ENST00000393546 K7EP13 123 aa12.94□□□□□ -0.34
PDLIM7-204ENST00000393546 BTF3P20290 206 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-204ENST00000393546 DNAH17Q9UFH2 4485 aa12.93□□□□□ -0.34
PDLIM7-204ENST00000393546 A0A1B0GUT8 65 aa12.93□□□□□ -0.34
PDLIM7-204ENST00000393546 M0QY20 66 aa12.93□□□□□ -0.34
PDLIM7-204ENST00000393546 SUMO4Q6EEV6 95 aa12.93□□□□□ -0.34
PDLIM7-204ENST00000393546 DNAJC30Q96LL9 226 aa12.93□□□□□ -0.34
PDLIM7-204ENST00000393546 PRSS29PA6NIE9 313 aa12.92□□□□□ -0.34
PDLIM7-204ENST00000393546 TNFRSF18Q9Y5U5 241 aa12.92□□□□□ -0.34
PDLIM7-204ENST00000393546 LINC01556Q5JQF7 62 aa12.91□□□□□ -0.34
PDLIM7-204ENST00000393546 RASL11AQ6T310 242 aa12.91□□□□□ -0.34
PDLIM7-204ENST00000393546 UQCC3Q6UW78 93 aa12.91□□□□□ -0.34
PDLIM7-204ENST00000393546 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
PDLIM7-204ENST00000393546 NAT8BQ9UHF3 227 aa12.91□□□□□ -0.34
PDLIM7-204ENST00000393546 PNRC1Q12796 327 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-204ENST00000393546 RIGQ13278 110 aa12.9□□□□□ -0.34
PDLIM7-204ENST00000393546 C10orf126Q8N4M7 172 aa12.9□□□□□ -0.34
PDLIM7-204ENST00000393546 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
PDLIM7-204ENST00000393546 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-204ENST00000393546 NIT2Q9NQR4 276 aa12.89□□□□□ -0.35
PDLIM7-204ENST00000393546 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-204ENST00000393546 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
PDLIM7-204ENST00000393546 TMEM97Q5BJF2 176 aa12.88□□□□□ -0.35
PDLIM7-204ENST00000393546 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 BIRC6Q9NR09 4857 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 IGHV3-30P01768 117 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 IGHV3-33P01772 117 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 IGHV3-30-3P0DP02 117 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 IGHV3-30-5P0DP03 117 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 NFE4Q86UQ8 179 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 GATD1Q8NB37 220 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 FRZBQ92765 325 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 TMEM191AQ9H0A3 160 aa12.87□□□□□ -0.35
PDLIM7-204ENST00000393546 TRBV6-8A0A0A6YYG3 113 aa12.86□□□□□ -0.35
PDLIM7-204ENST00000393546 FAT2Q9NYQ8 4349 aa12.85□□□□□ -0.35
PDLIM7-204ENST00000393546 TMEM218A2RU14 115 aa12.85□□□□□ -0.35
PDLIM7-204ENST00000393546 MT-ND4LP03901 98 aa12.85□□□□□ -0.35
PDLIM7-204ENST00000393546 COMMD7Q86VX2 200 aa12.85□□□□□ -0.35
PDLIM7-204ENST00000393546 URGCP-MRPS24S4R325 110 aa12.85□□□□□ -0.35
PDLIM7-204ENST00000393546 TRAV26-2A0A0B4J265 109 aa12.84□□□□□ -0.35
PDLIM7-204ENST00000393546 IBA57-AS1B1ANH7 110 aa12.84□□□□□ -0.35
PDLIM7-204ENST00000393546 F8W036 122 aa12.84□□□□□ -0.35
PDLIM7-204ENST00000393546 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
PDLIM7-204ENST00000393546 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
PDLIM7-204ENST00000393546 A0A1B0GW15 77 aa12.83□□□□□ -0.36
PDLIM7-204ENST00000393546 LINC00862A6NCI5 91 aa12.83□□□□□ -0.36
PDLIM7-204ENST00000393546 TNP2Q05952 138 aa12.83□□□□□ -0.36
PDLIM7-204ENST00000393546 NIT1Q86X76 327 aa12.83□□□□□ -0.36
PDLIM7-204ENST00000393546 A0A087WX48 190 aa12.82□□□□□ -0.36
PDLIM7-204ENST00000393546 TMEM262E9PQX1 116 aa12.82□□□□□ -0.36
PDLIM7-204ENST00000393546 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 A0A1B0GVY2 172 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 RAB4AP20338 218 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 CAMPP49913 170 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 NTM-AS1Q6ZSK4 140 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 CHCHD7Q9BUK0 85 aa12.81□□□□□ -0.36
PDLIM7-204ENST00000393546 S100A8P05109 93 aa12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 PKIAP61925 76 aa12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 Q6ZRN7 208 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 Q8N3U1 123 aa12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 RPL39LQ96EH5 51 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 RNF185Q96GF1 192 aa12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 SEC11CQ9BY50 192 aa12.8□□□□□ -0.36
PDLIM7-204ENST00000393546 IGHV1-24A0A0C4DH33 117 aa12.79□□□□□ -0.36
PDLIM7-204ENST00000393546 ADCYAP1P18509 176 aa12.79□□□□□ -0.36
PDLIM7-204ENST00000393546 LAGE3Q14657 143 aa12.79□□□□□ -0.36
PDLIM7-204ENST00000393546 ELOBQ15370 118 aa12.79□□□□□ -0.36
PDLIM7-204ENST00000393546 MRPL54Q6P161 138 aaKnown RBP12.79□□□□□ -0.36
PDLIM7-204ENST00000393546 COTL1Q14019 142 aa12.78□□□□□ -0.36
PDLIM7-204ENST00000393546 IQCJQ1A5X6 159 aa12.78□□□□□ -0.36
PDLIM7-204ENST00000393546 Q9HAA7 133 aa12.78□□□□□ -0.36
PDLIM7-204ENST00000393546 TRBV6-5A0A0K0K1A5 114 aa12.77□□□□□ -0.37
PDLIM7-204ENST00000393546 HBBP68871 147 aa12.77□□□□□ -0.37
PDLIM7-204ENST00000393546 FAM104BQ5XKR9 115 aa12.77□□□□□ -0.37
PDLIM7-204ENST00000393546 HECTD4Q9Y4D8 3996 aa12.76□□□□□ -0.37
PDLIM7-204ENST00000393546 TRAV8-3A0A0A6YYJ7 113 aa12.76□□□□□ -0.37
PDLIM7-204ENST00000393546 SDHAF1A6NFY7 115 aa12.76□□□□□ -0.37
PDLIM7-204ENST00000393546 ATP5L2Q7Z4Y8 100 aa12.76□□□□□ -0.37
PDLIM7-204ENST00000393546 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
PDLIM7-204ENST00000393546 KLK12Q9UKR0 248 aa12.76□□□□□ -0.37
PDLIM7-204ENST00000393546 A0A1B0GXF2 115 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 GAS8-AS1O95177 125 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 PPP1R17O96001 155 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 PMCHP20382 165 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 GAGE6Q13070 117 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 DEFB104AQ8WTQ1 72 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 TMEM243Q9BU79 118 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 PKD1P98161 4303 aa12.75□□□□□ -0.37
PDLIM7-204ENST00000393546 PSCAO43653 123 aa12.74□□□□□ -0.37
PDLIM7-204ENST00000393546 AMTP48728 403 aa12.74□□□□□ -0.37
PDLIM7-204ENST00000393546 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-204ENST00000393546 MPV17L2Q567V2 206 aa12.74□□□□□ -0.37
PDLIM7-204ENST00000393546 ATRAIDQ6UW56 229 aa12.74□□□□□ -0.37
PDLIM7-204ENST00000393546 TM2D2Q9BX73 214 aa12.74□□□□□ -0.37
PDLIM7-204ENST00000393546 KRTAP17-1Q9BYP8 105 aa12.74□□□□□ -0.37
PDLIM7-204ENST00000393546 CTDSP1Q9GZU7 261 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms