RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 Q9HAA7 133 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 BIN3Q9NQY0 253 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 HSPG2P98160 4391 aa5.17□□□□□ -1.58
HMGB3P1-201ENST00000393368 TRBV7-3A0A075B6L6 115 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 TRAV9-2A0A087WT02 112 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 TRBV10-1A0A0K0K1A3 114 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 XKRY2A2RUG3 117 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 GATCO43716 136 aaKnown RBP5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 NTF3P20783 257 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 FOXA3P55318 350 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 ERVFC1-1P60608 527 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 CACNG7P62955 275 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 RPL36AP83881 106 aaKnown RBP5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 TWIST1Q15672 202 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 SUMO4Q6EEV6 95 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 CFAP161Q6P656 301 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 SPATA12Q7Z6I5 190 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 DAZ4Q86SG3 579 aaKnown RBP5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 LINC01551Q86U37 167 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 DEFB104AQ8WTQ1 72 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 RPL36ALQ969Q0 106 aaKnown RBP5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 DNAJC30Q96LL9 226 aa5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 DAZ3Q9NR90 486 aaKnown RBP5.16□□□□□ -1.58
HMGB3P1-201ENST00000393368 TRAV26-2A0A0B4J265 109 aa5.15□□□□□ -1.59
HMGB3P1-201ENST00000393368 C16orf90A8MZG2 172 aa5.15□□□□□ -1.59
HMGB3P1-201ENST00000393368 F2Z2F3 143 aa5.15□□□□□ -1.59
HMGB3P1-201ENST00000393368 M0QY20 66 aa5.15□□□□□ -1.59
HMGB3P1-201ENST00000393368 FAM231DQ6ZW35 169 aa5.15□□□□□ -1.59
HMGB3P1-201ENST00000393368 OR10G8Q8NGN5 311 aa5.15□□□□□ -1.59
HMGB3P1-201ENST00000393368 PGLYRP4Q96LB8 373 aa5.15□□□□□ -1.59
HMGB3P1-201ENST00000393368 IBA57-AS1B1ANH7 110 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 GHRHP01286 108 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 BTF3P20290 206 aaKnown RBP5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 RPL23P62829 140 aaKnown RBP5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 ADIRFQ15847 76 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 C21orf62-AS1Q17RA5 79 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 XP32Q5T750 250 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 NFE4Q86UQ8 179 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 C10orf126Q8N4M7 172 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 DPH3P1Q9H4G8 78 aa5.14□□□□□ -1.59
HMGB3P1-201ENST00000393368 A0A087WTM6 91 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 A0A087WWC5 75 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 TRBV6-8A0A0A6YYG3 113 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 TRGC1P0CF51 173 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 NTM-AS1Q6ZSK4 140 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 NIT1Q86X76 327 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 ISOC2Q96AB3 205 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 CNFNQ9BYD5 112 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
HMGB3P1-201ENST00000393368 DNAH8Q96JB1 4490 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 HIGD1CA8MV81 97 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 A8MWL6 223 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 TMEM262E9PQX1 116 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 K7EP13 123 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 LECT2O14960 151 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 PSCAO43653 123 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 NDUFS6O75380 124 aaKnown RBP5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 GAS8-AS1O95177 125 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 GAGE6Q13070 117 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 WFDC2Q14508 124 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 PEA15Q15121 130 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 TMEM241Q24JQ0 296 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 MPV17L2Q567V2 206 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 WDR73Q6P4I2 378 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 RASL11AQ6T310 242 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 GATD1Q8NB37 220 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 TSKUQ8WUA8 353 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 RPL39LQ96EH5 51 aaKnown RBP5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 CHCHD5Q9BSY4 110 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 OSTCQ9NRP0 149 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 NAT8Q9UHE5 227 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 KLK12Q9UKR0 248 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 URGCP-MRPS24S4R325 110 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 V9GYV3 84 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
HMGB3P1-201ENST00000393368 A0A087WX48 190 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 LRCOL1A6NCL2 159 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 H7C1H1 209 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 FAM74A3Q4VXF1 159 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 CT83Q5H943 113 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 CLPSL2Q6UWE3 100 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 C15orf54Q8N8G6 183 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 Q8N976 141 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 NUP35Q8NFH5 326 aa5.11□□□□□ -1.59
HMGB3P1-201ENST00000393368 IGKV2D-24A0A075B6R9 120 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 EREGO14944 169 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 IFITM2Q01629 132 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 LAGE3Q14657 143 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 KCNIP4Q6PIL6 250 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 ATRAIDQ6UW56 229 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 SMIM15Q7Z3B0 74 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 MAPKAPK5-AS1Q8N8E1 139 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 UBE2WQ96B02 151 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 BORCS7Q96B45 105 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 NIT2Q9NQR4 276 aa5.1□□□□□ -1.59
HMGB3P1-201ENST00000393368 TRBV25-1A0A075B6N4 114 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 IGHV1-24A0A0C4DH33 117 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 A0A1B0GUT8 65 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 SMKR1H3BMG3 65 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms