RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 FAM223BA6NKX1 122 aa8.16□□□□□ -1.1
BRF1-204ENST00000392557 IGHG2P01859 326 aa8.16□□□□□ -1.1
BRF1-204ENST00000392557 LYRM7Q5U5X0 104 aa8.16□□□□□ -1.1
BRF1-204ENST00000392557 FAM223AQ8IWN6 122 aa8.16□□□□□ -1.1
BRF1-204ENST00000392557 SDHAF1A6NFY7 115 aa8.16□□□□□ -1.1
BRF1-204ENST00000392557 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
BRF1-204ENST00000392557 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
BRF1-204ENST00000392557 SS18L2Q9UHA2 77 aa8.16□□□□□ -1.1
BRF1-204ENST00000392557 PPP1R17O96001 155 aa8.15□□□□□ -1.1
BRF1-204ENST00000392557 MRPL53Q96EL3 112 aaKnown RBP8.15□□□□□ -1.1
BRF1-204ENST00000392557 LINC01546A6NGU7 62 aa8.15□□□□□ -1.1
BRF1-204ENST00000392557 MORN3Q6PF18 240 aaPredicted RBP8.15□□□□□ -1.1
BRF1-204ENST00000392557 PSMG3-AS1Q96PY0 264 aa8.15□□□□□ -1.1
BRF1-204ENST00000392557 ITPR2Q14571 2701 aa8.15□□□□□ -1.11
BRF1-204ENST00000392557 TENM4Q6N022 2769 aa8.15□□□□□ -1.11
BRF1-204ENST00000392557 IGHV3-73A0A0B4J1V6 119 aa8.15□□□□□ -1.11
BRF1-204ENST00000392557 PMVKQ15126 192 aa8.15□□□□□ -1.11
BRF1-204ENST00000392557 TRBV7-9A0A0J9YWB2 115 aa8.14□□□□□ -1.11
BRF1-204ENST00000392557 TSPAN13O95857 204 aa8.14□□□□□ -1.11
BRF1-204ENST00000392557 FOXI1Q12951 378 aa8.14□□□□□ -1.11
BRF1-204ENST00000392557 Q96MF0 132 aa8.14□□□□□ -1.11
BRF1-204ENST00000392557 VCYO14598 125 aa8.14□□□□□ -1.11
BRF1-204ENST00000392557 SUMO4Q6EEV6 95 aa8.14□□□□□ -1.11
BRF1-204ENST00000392557 KLK9Q9UKQ9 250 aa8.14□□□□□ -1.11
BRF1-204ENST00000392557 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 A8MWV9 139 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 GEMIN7Q9H840 131 aaKnown RBP8.13□□□□□ -1.11
BRF1-204ENST00000392557 NBPF19A0A087WUL8 3843 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 IGHV4-4A0A075B6R2 117 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 NDUFA4O00483 81 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 NPC2P61916 151 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 C1QTNF4Q9BXJ3 329 aa8.13□□□□□ -1.11
BRF1-204ENST00000392557 RNASE3P12724 160 aaKnown RBP8.12□□□□□ -1.11
BRF1-204ENST00000392557 GATA3P23771 443 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 SMIM20Q8N5G0 67 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 LENEPQ9Y5L5 61 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 C9JAW5 83 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 PAPPA-AS1Q5QFB9 102 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 J3QQQ9 107 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 PRM2P04554 102 aa8.12□□□□□ -1.11
BRF1-204ENST00000392557 SPINK13Q1W4C9 94 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 DEFB113Q30KQ7 82 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 DAZ1Q9NQZ3 744 aaKnown RBP8.11□□□□□ -1.11
BRF1-204ENST00000392557 GCN1Q92616 2671 aaKnown RBP8.11□□□□□ -1.11
BRF1-204ENST00000392557 TCL1BO95988 128 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 C19orf54Q5BKX5 351 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 RNASE13Q5GAN3 156 aaKnown RBP8.11□□□□□ -1.11
BRF1-204ENST00000392557 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 NDUFA11Q86Y39 141 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 GPHB5Q86YW7 130 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 U3KQE9 123 aa8.11□□□□□ -1.11
BRF1-204ENST00000392557 A0A0J9YY99 117 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 IGHV4-31P0DP07 118 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 ZNF876PQ49A33 203 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 NFE4Q86UQ8 179 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 PRO1854Q9UHT4 67 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 MUC4Q99102 2169 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 CFAP126Q5VTH2 177 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 SPATA25Q9BR10 227 aa8.1□□□□□ -1.11
BRF1-204ENST00000392557 BRI3O95415 125 aa8.09□□□□□ -1.11
BRF1-204ENST00000392557 TSPEAR-AS2P59090 65 aa8.09□□□□□ -1.11
BRF1-204ENST00000392557 TRPT1Q86TN4 253 aaKnown RBP8.09□□□□□ -1.11
BRF1-204ENST00000392557 PRO0461Q9UI25 63 aa8.09□□□□□ -1.11
BRF1-204ENST00000392557 ERG28Q9UKR5 140 aa8.09□□□□□ -1.11
BRF1-204ENST00000392557 CRYGDP07320 174 aa8.09□□□□□ -1.11
BRF1-204ENST00000392557 PPDPFLQ8WWR9 84 aa8.09□□□□□ -1.11
BRF1-204ENST00000392557 CFC1BP0CG36 223 aa8.09□□□□□ -1.12
BRF1-204ENST00000392557 CFC1P0CG37 223 aa8.09□□□□□ -1.12
BRF1-204ENST00000392557 SCGB1A1P11684 91 aa8.09□□□□□ -1.12
BRF1-204ENST00000392557 ZNRF2Q8NHG8 242 aa8.09□□□□□ -1.12
BRF1-204ENST00000392557 TNFRSF18Q9Y5U5 241 aa8.09□□□□□ -1.12
BRF1-204ENST00000392557 A0A096LNT2 108 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 KNCNA6PVL3 124 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 TSHBP01222 138 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
BRF1-204ENST00000392557 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
BRF1-204ENST00000392557 SNRPD3P62318 126 aaKnown RBP8.08□□□□□ -1.12
BRF1-204ENST00000392557 C10orf126Q8N4M7 172 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 SYNJ2BPP57105 145 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 DEFB136Q30KP8 78 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 ANKRD29Q8N6D5 301 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 VPREB3Q9UKI3 123 aa8.08□□□□□ -1.12
BRF1-204ENST00000392557 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 M0QXV9 152 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 IGLV1-40P01703 118 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 TMEM141Q96I45 108 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 FAM110AQ9BQ89 295 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 ZNF469Q96JG9 3925 aaPredicted RBP8.07□□□□□ -1.12
BRF1-204ENST00000392557 TEN1Q86WV5 123 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 WFDC11Q8NEX6 87 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 H3BUA1 57 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 J3QLI3 93 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 SLC25A20O43772 301 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 CD28P10747 220 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 UBE2D1P51668 147 aa8.07□□□□□ -1.12
BRF1-204ENST00000392557 Q8N1Y9 231 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms