RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PRB1P04280 392 aa11.5□□□□□ -0.57
CCDC50-201ENST00000392455 GP9P14770 177 aa11.49□□□□□ -0.57
CCDC50-201ENST00000392455 MIAQ16674 131 aa11.49□□□□□ -0.57
CCDC50-201ENST00000392455 COA6Q5JTJ3 125 aaKnown RBP11.49□□□□□ -0.57
CCDC50-201ENST00000392455 TMEM89A2RUT3 159 aa11.49□□□□□ -0.57
CCDC50-201ENST00000392455 PCP2Q8IVA1 136 aa11.49□□□□□ -0.57
CCDC50-201ENST00000392455 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
CCDC50-201ENST00000392455 UBE2D2P62837 147 aa11.48□□□□□ -0.57
CCDC50-201ENST00000392455 A0A0J9YY99 117 aa11.48□□□□□ -0.57
CCDC50-201ENST00000392455 ADCYAP1P18509 176 aa11.48□□□□□ -0.57
CCDC50-201ENST00000392455 TMEM263Q8WUH6 116 aaKnown RBP11.48□□□□□ -0.57
CCDC50-201ENST00000392455 LOXP28300 417 aaPredicted RBP11.48□□□□□ -0.57
CCDC50-201ENST00000392455 SERP2Q8N6R1 65 aa11.48□□□□□ -0.57
CCDC50-201ENST00000392455 C17orf58Q2M2W7 97 aa11.47□□□□□ -0.57
CCDC50-201ENST00000392455 PTPRSQ13332 1948 aa11.47□□□□□ -0.57
CCDC50-201ENST00000392455 BLCAPP62952 87 aa11.47□□□□□ -0.57
CCDC50-201ENST00000392455 C1orf195Q5TG92 126 aa11.46□□□□□ -0.57
CCDC50-201ENST00000392455 PRYO14603 147 aa11.46□□□□□ -0.57
CCDC50-201ENST00000392455 CCDC140Q96MF4 163 aa11.46□□□□□ -0.57
CCDC50-201ENST00000392455 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.57
CCDC50-201ENST00000392455 MDFICQ9P1T7 246 aa11.46□□□□□ -0.58
CCDC50-201ENST00000392455 HIVEP3Q5T1R4 2406 aa11.46□□□□□ -0.58
CCDC50-201ENST00000392455 IGKV1-6A0A0C4DH72 117 aa11.46□□□□□ -0.58
CCDC50-201ENST00000392455 FAM120AOSQ5T036 256 aa11.46□□□□□ -0.58
CCDC50-201ENST00000392455 ZNF491Q8N8L2 437 aa11.45□□□□□ -0.58
CCDC50-201ENST00000392455 MUC7Q8TAX7 377 aa11.45□□□□□ -0.58
CCDC50-201ENST00000392455 TCL1BO95988 128 aa11.45□□□□□ -0.58
CCDC50-201ENST00000392455 A0A0J9YXY3 114 aa11.45□□□□□ -0.58
CCDC50-201ENST00000392455 FHL1Q13642 323 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 TPSG1Q9NRR2 321 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 NCR3O14931 201 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 WISP1O95388 367 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 C20orf197Q8N268 126 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 IGFL3Q6UXB1 125 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 J3QKU1 62 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 K7EMT4 169 aa11.44□□□□□ -0.58
CCDC50-201ENST00000392455 WT1-ASQ06250 92 aa11.43□□□□□ -0.58
CCDC50-201ENST00000392455 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
CCDC50-201ENST00000392455 MIR7-3HGQ8N6C7 128 aa11.43□□□□□ -0.58
CCDC50-201ENST00000392455 SPRY4Q9C004 299 aa11.43□□□□□ -0.58
CCDC50-201ENST00000392455 DHRS4-AS1Q9P1J3 65 aa11.43□□□□□ -0.58
CCDC50-201ENST00000392455 ASPHD1Q5U4P2 390 aa11.43□□□□□ -0.58
CCDC50-201ENST00000392455 CTRLP40313 264 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 Q6ZR03 302 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 C9orf85Q96MD7 179 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 GNRH2O43555 120 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 UBE2D4Q9Y2X8 147 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 A0A0U1RQV1 116 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 NPBQ8NG41 125 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 IGKV2D-26A0A0A0MRZ7 120 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 NDUFA7O95182 113 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 WDR86Q86TI4 376 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 Q8NFD4 153 aa11.42□□□□□ -0.58
CCDC50-201ENST00000392455 FAM222AQ5U5X8 452 aa11.41□□□□□ -0.58
CCDC50-201ENST00000392455 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
CCDC50-201ENST00000392455 PRO0255Q9UI72 69 aa11.41□□□□□ -0.58
CCDC50-201ENST00000392455 RNF138Q8WVD3 245 aa11.41□□□□□ -0.58
CCDC50-201ENST00000392455 TRAV26-1A0A087WT03 109 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 IGHV3-33P01772 117 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 IGHV3-30-3P0DP02 117 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 TRBV6-1A0A0K0K1D8 114 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 TEX49A0A1B0GTD5 131 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 WFDC2Q14508 124 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 UBE2D1P51668 147 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 PIK3CD-AS1Q5SR53 167 aa11.4□□□□□ -0.58
CCDC50-201ENST00000392455 IGLV3-9A0A075B6K5 115 aa11.39□□□□□ -0.59
CCDC50-201ENST00000392455 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
CCDC50-201ENST00000392455 RPL39LQ96EH5 51 aaKnown RBP11.39□□□□□ -0.59
CCDC50-201ENST00000392455 C2CD3Q4AC94 2353 aa11.39□□□□□ -0.59
CCDC50-201ENST00000392455 LINC00474Q9P2X8 69 aa11.39□□□□□ -0.59
CCDC50-201ENST00000392455 SMAD5-AS1Q9Y6J3 95 aa11.39□□□□□ -0.59
CCDC50-201ENST00000392455 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
CCDC50-201ENST00000392455 ODF3Q96PU9 254 aa11.38□□□□□ -0.59
CCDC50-201ENST00000392455 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
CCDC50-201ENST00000392455 ZNF503-AS2A6NEH8 195 aa11.38□□□□□ -0.59
CCDC50-201ENST00000392455 P0DMU3 169 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 FAM231AP0DMU4 169 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 FAM231CP0DMU5 169 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 WFDC10BQ8IUB3 73 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 SMIM26A0A096LP01 95 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 TIMM17BO60830 172 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 CLEC2BQ92478 149 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 WIPF3A6NGB9 483 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 LYPD6BQ8NI32 183 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 LINC01548A6NM66 108 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 IGLV2-23P01705 113 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 ODF3L1Q8IXM7 274 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 C15orf65H3BRN8 121 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 PROK2Q9HC23 129 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 A0A0J9YXV3 536 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 DEFB136Q30KP8 78 aa11.37□□□□□ -0.59
CCDC50-201ENST00000392455 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
CCDC50-201ENST00000392455 KLK12Q9UKR0 248 aa11.36□□□□□ -0.59
CCDC50-201ENST00000392455 LRP4O75096 1905 aa11.36□□□□□ -0.59
CCDC50-201ENST00000392455 MUC6Q6W4X9 2439 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms