RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 AKAP9Q99996 3911 aa-2.12□□□□□ -2.75
TRAJ48-201ENST00000390489 IFT172Q9UG01 1749 aa-2.12□□□□□ -2.75
TRAJ48-201ENST00000390489 ARFGEF1Q9Y6D6 1849 aa-2.12□□□□□ -2.75
TRAJ48-201ENST00000390489 LRP6O75581 1613 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 ERCC6L2Q5T890 1561 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 SONP18583 2426 aaKnown RBP-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 CCDC179H3BU77 68 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 IFNA1P01562 189 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 HSD17B12Q53GQ0 312 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 DYNLRB2Q8TF09 96 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 SDF2Q99470 211 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 UFC1Q9Y3C8 167 aa-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 TNRC18O15417 2968 aaPredicted RBP-2.13□□□□□ -2.75
TRAJ48-201ENST00000390489 FER1L6Q2WGJ9 1857 aa-2.14□□□□□ -2.75
TRAJ48-201ENST00000390489 CRYBA4P53673 196 aa-2.14□□□□□ -2.75
TRAJ48-201ENST00000390489 CFAP126Q5VTH2 177 aa-2.14□□□□□ -2.75
TRAJ48-201ENST00000390489 NPVFQ9HCQ7 196 aa-2.14□□□□□ -2.75
TRAJ48-201ENST00000390489 CBLN4Q9NTU7 201 aa-2.14□□□□□ -2.75
TRAJ48-201ENST00000390489 GOLGA4Q13439 2230 aaKnown RBP-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 PAPPAQ13219 1627 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 TRAV12-3A0A0B4J271 114 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 H0YJX3 145 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 TNFP01375 233 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 SMIM6P0DI80 62 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 HIST1H1BP16401 226 aaKnown RBP-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 TMED2Q15363 201 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 DHRS4L2Q6PKH6 230 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 BAGE3Q86Y29 109 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 SPRR2FQ96RM1 72 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 TEP1Q99973 2627 aaKnown RBP-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 UHRF1BP1LA0JNW5 1464 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 MYH3P11055 1940 aa-2.15□□□□□ -2.75
TRAJ48-201ENST00000390489 DNAH9Q9NYC9 4486 aa-2.16□□□□□ -2.76
TRAJ48-201ENST00000390489 FAM24BQ8N5W8 94 aa-2.16□□□□□ -2.76
TRAJ48-201ENST00000390489 DYDC1Q8WWB3 177 aa-2.16□□□□□ -2.76
TRAJ48-201ENST00000390489 FXYD6Q9H0Q3 95 aa-2.16□□□□□ -2.76
TRAJ48-201ENST00000390489 IBTKQ9P2D0 1353 aaPredicted RBP-2.16□□□□□ -2.76
TRAJ48-201ENST00000390489 A2MP01023 1474 aa-2.16□□□□□ -2.76
TRAJ48-201ENST00000390489 YTHDC2Q9H6S0 1430 aaKnown RBP-2.17□□□□□ -2.76
TRAJ48-201ENST00000390489 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.17□□□□□ -2.76
TRAJ48-201ENST00000390489 DNAH2Q9P225 4427 aa-2.17□□□□□ -2.76
TRAJ48-201ENST00000390489 J3KT08 172 aa-2.17□□□□□ -2.76
TRAJ48-201ENST00000390489 RPL22P35268 128 aaKnown RBP-2.17□□□□□ -2.76
TRAJ48-201ENST00000390489 SLC35B3Q9H1N7 401 aa-2.17□□□□□ -2.76
TRAJ48-201ENST00000390489 M0QZK8 103 aa-2.18□□□□□ -2.76
TRAJ48-201ENST00000390489 NIPSNAP2O75323 286 aa-2.18□□□□□ -2.76
TRAJ48-201ENST00000390489 SLC25A5P05141 298 aaKnown RBP-2.18□□□□□ -2.76
TRAJ48-201ENST00000390489 CTXN2P0C2S0 81 aa-2.18□□□□□ -2.76
TRAJ48-201ENST00000390489 TCTAP57738 103 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 GNG3P63215 75 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 DEFB135Q30KP9 77 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 SNX29P2Q8IUI4 249 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 ATP6V0E2Q8NHE4 81 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 CEP19Q96LK0 163 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 CFAP53Q96M91 514 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 LINC00472Q9H8W2 130 aa-2.19□□□□□ -2.76
TRAJ48-201ENST00000390489 MAFIPQ8WZ33 124 aa-2.2□□□□□ -2.76
TRAJ48-201ENST00000390489 NOP16Q9Y3C1 178 aaKnown RBP-2.2□□□□□ -2.76
TRAJ48-201ENST00000390489 CUBNO60494 3623 aa-2.2□□□□□ -2.76
TRAJ48-201ENST00000390489 RYR2Q92736 4967 aa-2.21□□□□□ -2.76
TRAJ48-201ENST00000390489 FAM92AA1XBS5 289 aa-2.21□□□□□ -2.76
TRAJ48-201ENST00000390489 FAM107AO95990 144 aa-2.21□□□□□ -2.76
TRAJ48-201ENST00000390489 PSPHP78330 225 aa-2.21□□□□□ -2.76
TRAJ48-201ENST00000390489 CCDC32Q9BV29 185 aa-2.21□□□□□ -2.76
TRAJ48-201ENST00000390489 MED31Q9Y3C7 131 aa-2.21□□□□□ -2.76
TRAJ48-201ENST00000390489 BORCS7-ASMTA0A0B4J1R7 106 aa-2.22□□□□□ -2.76
TRAJ48-201ENST00000390489 PRRC2CQ9Y520 2896 aaKnown RBP-2.22□□□□□ -2.77
TRAJ48-201ENST00000390489 NBASA2RRP1 2371 aa-2.22□□□□□ -2.77
TRAJ48-201ENST00000390489 LRRC37A2A6NM11 1700 aa-2.22□□□□□ -2.77
TRAJ48-201ENST00000390489 MED23Q9ULK4 1368 aa-2.23□□□□□ -2.77
TRAJ48-201ENST00000390489 TCRAP04437 139 aa-2.23□□□□□ -2.77
TRAJ48-201ENST00000390489 REEP5Q00765 189 aa-2.23□□□□□ -2.77
TRAJ48-201ENST00000390489 HRCT1Q6UXD1 115 aa-2.23□□□□□ -2.77
TRAJ48-201ENST00000390489 SMIM20Q8N5G0 67 aa-2.23□□□□□ -2.77
TRAJ48-201ENST00000390489 DEFB123Q8N688 67 aa-2.23□□□□□ -2.77
TRAJ48-201ENST00000390489 DEFB105AQ8NG35 78 aa-2.23□□□□□ -2.77
TRAJ48-201ENST00000390489 J3QLW9 94 aa-2.24□□□□□ -2.77
TRAJ48-201ENST00000390489 YPEL1O60688 119 aa-2.24□□□□□ -2.77
TRAJ48-201ENST00000390489 PFDN1O60925 122 aa-2.24□□□□□ -2.77
TRAJ48-201ENST00000390489 DCUN1D2Q6PH85 259 aa-2.24□□□□□ -2.77
TRAJ48-201ENST00000390489 ATP11AUNQ6ZP68 121 aa-2.24□□□□□ -2.77
TRAJ48-201ENST00000390489 TMED4Q7Z7H5 227 aa-2.24□□□□□ -2.77
TRAJ48-201ENST00000390489 LRRC37A3O60309 1634 aa-2.24□□□□□ -2.77
TRAJ48-201ENST00000390489 RNF213Q63HN8 5207 aa-2.25□□□□□ -2.77
TRAJ48-201ENST00000390489 CLPSL1A2RUU4 121 aa-2.25□□□□□ -2.77
TRAJ48-201ENST00000390489 RBP4P02753 201 aa-2.25□□□□□ -2.77
TRAJ48-201ENST00000390489 SMIM4Q8WVI0 70 aa-2.25□□□□□ -2.77
TRAJ48-201ENST00000390489 HSD11B1P28845 292 aa-2.26□□□□□ -2.77
TRAJ48-201ENST00000390489 UBE2D1P51668 147 aa-2.26□□□□□ -2.77
TRAJ48-201ENST00000390489 MRPS25P82663 173 aaKnown RBP-2.26□□□□□ -2.77
TRAJ48-201ENST00000390489 TMEM91Q6ZNR0 172 aa-2.26□□□□□ -2.77
TRAJ48-201ENST00000390489 DEFB112Q30KQ8 113 aa-2.27□□□□□ -2.77
TRAJ48-201ENST00000390489 DNAJC15Q9Y5T4 150 aa-2.27□□□□□ -2.77
TRAJ48-201ENST00000390489 PLECQ15149 4684 aaKnown RBP-2.27□□□□□ -2.77
TRAJ48-201ENST00000390489 KDM5CP41229 1560 aa-2.27□□□□□ -2.77
TRAJ48-201ENST00000390489 KDM5AP29375 1690 aaKnown RBP-2.28□□□□□ -2.77
TRAJ48-201ENST00000390489 DOCK1Q14185 1865 aa-2.28□□□□□ -2.77
TRAJ48-201ENST00000390489 POLR2HP52434 150 aaKnown RBP-2.28□□□□□ -2.77
TRAJ48-201ENST00000390489 THEM6Q8WUY1 208 aa-2.28□□□□□ -2.77
TRAJ48-201ENST00000390489 RPRMQ9NS64 109 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms