RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 TRBV12-3P01733 135 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 RNASE13Q5GAN3 156 aaKnown RBP10.06□□□□□ -0.8
CCDC57-202ENST00000389641 TMEM141Q96I45 108 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 TRAV8-3A0A0A6YYJ7 113 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 GRNP28799 593 aaKnown RBP10.06□□□□□ -0.8
CCDC57-202ENST00000389641 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
CCDC57-202ENST00000389641 Q6Q795 121 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 LINC00477Q96M19 166 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 KIF25-AS1Q9Y6Z4 181 aa10.06□□□□□ -0.8
CCDC57-202ENST00000389641 M0QXV9 152 aa10.05□□□□□ -0.8
CCDC57-202ENST00000389641 LEPROTO15243 131 aa10.05□□□□□ -0.8
CCDC57-202ENST00000389641 MRPL53Q96EL3 112 aaKnown RBP10.05□□□□□ -0.8
CCDC57-202ENST00000389641 A0A0J9YXY3 114 aa10.05□□□□□ -0.8
CCDC57-202ENST00000389641 PPP1R17O96001 155 aa10.05□□□□□ -0.8
CCDC57-202ENST00000389641 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
CCDC57-202ENST00000389641 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
CCDC57-202ENST00000389641 TMEM95Q3KNT9 176 aa10.05□□□□□ -0.8
CCDC57-202ENST00000389641 ITLN2Q8WWU7 325 aaPredicted RBP10.05□□□□□ -0.8
CCDC57-202ENST00000389641 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
CCDC57-202ENST00000389641 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
CCDC57-202ENST00000389641 TRGV11A0A075B6L2 103 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 LOC107984640A0A0U1RRK4 108 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 YAE1D1Q9NRH1 226 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.04□□□□□ -0.8
CCDC57-202ENST00000389641 IGFL3Q6UXB1 125 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 C9orf139Q6ZV77 190 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 TMEM219Q86XT9 240 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 DAND5Q8N907 189 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 MDFICQ9P1T7 246 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
CCDC57-202ENST00000389641 ICOSQ9Y6W8 199 aa10.04□□□□□ -0.8
CCDC57-202ENST00000389641 CREBBPQ92793 2442 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 TRAV12-3A0A0B4J271 114 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 OOSP1A8MZH6 123 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 M0R2P5 195 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 IGKV3-20P01619 116 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 CELSR2Q9HCU4 2923 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 LINC01587Q99440 93 aa10.03□□□□□ -0.8
CCDC57-202ENST00000389641 TRBV30A0A0K0K1B3 111 aa10.02□□□□□ -0.8
CCDC57-202ENST00000389641 IGHV3-11P01762 117 aa10.02□□□□□ -0.8
CCDC57-202ENST00000389641 ZFP36P26651 326 aaKnown RBP10.02□□□□□ -0.8
CCDC57-202ENST00000389641 FLNCQ14315 2725 aa10.02□□□□□ -0.81
CCDC57-202ENST00000389641 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.81
CCDC57-202ENST00000389641 A0A087WW49 117 aa10.02□□□□□ -0.81
CCDC57-202ENST00000389641 IGHV3-30-3P0DP02 117 aa10.02□□□□□ -0.81
CCDC57-202ENST00000389641 U3KQE9 123 aa10.02□□□□□ -0.81
CCDC57-202ENST00000389641 PIEZO1Q92508 2521 aa10.02□□□□□ -0.81
CCDC57-202ENST00000389641 LENEPQ9Y5L5 61 aa10.01□□□□□ -0.81
CCDC57-202ENST00000389641 DUX5Q96PT3 197 aa10.01□□□□□ -0.81
CCDC57-202ENST00000389641 CFAP46Q8IYW2 2715 aa10□□□□□ -0.81
CCDC57-202ENST00000389641 M0R1W7 72 aa10□□□□□ -0.81
CCDC57-202ENST00000389641 OVOL1O14753 267 aa10□□□□□ -0.81
CCDC57-202ENST00000389641 C9orf153Q5TBE3 101 aa10□□□□□ -0.81
CCDC57-202ENST00000389641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10□□□□□ -0.816e-7■■■■■ 36.6
CCDC57-202ENST00000389641 HIVEP3Q5T1R4 2406 aa10□□□□□ -0.81
CCDC57-202ENST00000389641 TRAV12-2A0A075B6T6 113 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 IGHV3OR16-10A0A075B7F0 116 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 TRBV7-1A0A0A6YYK4 115 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 TRBV27A0A0K0K1C4 114 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 A0A0U1RRA0 63 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 EDN2P20800 178 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 EBI3Q14213 229 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 I3L3M4 83 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 COX6CP09669 75 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 ATP5J2P56134 94 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 CACNA1AO00555 2505 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 IGHV3-73A0A0B4J1V6 119 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 Q8NA96 180 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 LITAFQ99732 161 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
CCDC57-202ENST00000389641 MINOS1Q5TGZ0 78 aa9.98□□□□□ -0.81
CCDC57-202ENST00000389641 IGLV4-3A0A075B6K6 122 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 SAA4P35542 130 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 TMEM101Q96IK0 257 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 SOCS3O14543 225 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 RS1O15537 224 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 POM121L12Q8N7R1 296 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 PKD1L2Q7Z442 2459 aa9.97□□□□□ -0.81
CCDC57-202ENST00000389641 M0QY20 66 aa9.96□□□□□ -0.81
CCDC57-202ENST00000389641 KLK9Q9UKQ9 250 aa9.96□□□□□ -0.81
CCDC57-202ENST00000389641 NACAE9PAV3 2078 aa9.96□□□□□ -0.81
CCDC57-202ENST00000389641 C20orf203Q8NBC4 194 aa9.96□□□□□ -0.82
CCDC57-202ENST00000389641 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.82
CCDC57-202ENST00000389641 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
CCDC57-202ENST00000389641 HTN1P15515 57 aa9.96□□□□□ -0.82
CCDC57-202ENST00000389641 SMCR5Q8TEV8 140 aa9.96□□□□□ -0.82
CCDC57-202ENST00000389641 H3BT86 120 aa9.95□□□□□ -0.82
CCDC57-202ENST00000389641 CD28P10747 220 aa9.95□□□□□ -0.82
CCDC57-202ENST00000389641 IGF2-ASQ6U949 168 aa9.95□□□□□ -0.82
CCDC57-202ENST00000389641 FAM19A4Q96LR4 140 aa9.95□□□□□ -0.82
CCDC57-202ENST00000389641 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
CCDC57-202ENST00000389641 MINOS1-NBL1R4GNA1 71 aa9.95□□□□□ -0.82
CCDC57-202ENST00000389641 ACACBO00763 2458 aa9.95□□□□□ -0.82
CCDC57-202ENST00000389641 LST1O00453 97 aa9.94□□□□□ -0.82
CCDC57-202ENST00000389641 NXPH4O95158 308 aa9.94□□□□□ -0.82
CCDC57-202ENST00000389641 IGHV1-69P01742 117 aa9.94□□□□□ -0.82
CCDC57-202ENST00000389641 ZNF625Q96I27 306 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms