RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 AGRNO00468 2067 aa10.27□□□□□ -0.76
NEK4-202ENST00000383721 A0A0J9YX75 114 aa10.27□□□□□ -0.76
NEK4-202ENST00000383721 SDHAF1A6NFY7 115 aa10.27□□□□□ -0.76
NEK4-202ENST00000383721 EMP1P54849 157 aa10.27□□□□□ -0.76
NEK4-202ENST00000383721 RRN3P1Q2M238 152 aa10.27□□□□□ -0.76
NEK4-202ENST00000383721 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.76
NEK4-202ENST00000383721 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.76
NEK4-202ENST00000383721 LGALS9O00182 355 aa10.27□□□□□ -0.77
NEK4-202ENST00000383721 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.77
NEK4-202ENST00000383721 ODF3Q96PU9 254 aa10.27□□□□□ -0.77
NEK4-202ENST00000383721 KIR2DL4Q99706 377 aa10.27□□□□□ -0.77
NEK4-202ENST00000383721 NF1P21359 2839 aa10.27□□□□□ -0.77
NEK4-202ENST00000383721 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
NEK4-202ENST00000383721 RPL24P83731 157 aaKnown RBP10.26□□□□□ -0.77
NEK4-202ENST00000383721 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
NEK4-202ENST00000383721 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
NEK4-202ENST00000383721 K7EQG2 157 aa10.26□□□□□ -0.77
NEK4-202ENST00000383721 SCGB2A2Q13296 93 aa10.26□□□□□ -0.77
NEK4-202ENST00000383721 PMVKQ15126 192 aa10.26□□□□□ -0.77
NEK4-202ENST00000383721 Q8N1Y9 231 aa10.26□□□□□ -0.77
NEK4-202ENST00000383721 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
NEK4-202ENST00000383721 H3BMG7 143 aa10.25□□□□□ -0.77
NEK4-202ENST00000383721 MORN3Q6PF18 240 aaPredicted RBP10.25□□□□□ -0.77
NEK4-202ENST00000383721 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
NEK4-202ENST00000383721 SNRPD3P62318 126 aaKnown RBP10.25□□□□□ -0.77
NEK4-202ENST00000383721 WFDC2Q14508 124 aa10.25□□□□□ -0.77
NEK4-202ENST00000383721 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
NEK4-202ENST00000383721 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
NEK4-202ENST00000383721 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
NEK4-202ENST00000383721 SETD2Q9BYW2 2564 aaPredicted RBP10.25□□□□□ -0.77
NEK4-202ENST00000383721 SPINK13Q1W4C9 94 aa10.24□□□□□ -0.77
NEK4-202ENST00000383721 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
NEK4-202ENST00000383721 TMEM89A2RUT3 159 aa10.24□□□□□ -0.77
NEK4-202ENST00000383721 M0QY20 66 aa10.24□□□□□ -0.77
NEK4-202ENST00000383721 SYNJ2BPP57105 145 aa10.24□□□□□ -0.77
NEK4-202ENST00000383721 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
NEK4-202ENST00000383721 ZNF256Q9Y2P7 627 aaPredicted RBP10.24□□□□□ -0.77
NEK4-202ENST00000383721 F8W1H4 67 aa10.23□□□□□ -0.77
NEK4-202ENST00000383721 HOXA3O43365 443 aaPredicted RBP10.23□□□□□ -0.77
NEK4-202ENST00000383721 IGHV1OR15-1A0A075B7D0 117 aa10.23□□□□□ -0.77
NEK4-202ENST00000383721 ZNF56Q15929 161 aa10.23□□□□□ -0.77
NEK4-202ENST00000383721 ZNRF2Q8NHG8 242 aa10.23□□□□□ -0.77
NEK4-202ENST00000383721 ZNF876PQ49A33 203 aa10.22□□□□□ -0.77
NEK4-202ENST00000383721 SYT8Q8NBV8 401 aa10.22□□□□□ -0.77
NEK4-202ENST00000383721 DUX5Q96PT3 197 aa10.22□□□□□ -0.77
NEK4-202ENST00000383721 TSPEAR-AS2P59090 65 aa10.22□□□□□ -0.77
NEK4-202ENST00000383721 HERVK_113P61574 105 aa10.22□□□□□ -0.77
NEK4-202ENST00000383721 SPANXB1Q9NS25 103 aaPredicted RBP10.22□□□□□ -0.77
NEK4-202ENST00000383721 JMJD1CQ15652 2540 aa10.22□□□□□ -0.77
NEK4-202ENST00000383721 UBE2D1P51668 147 aa10.21□□□□□ -0.77
NEK4-202ENST00000383721 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
NEK4-202ENST00000383721 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.77
NEK4-202ENST00000383721 A0A0J9YY99 117 aa10.21□□□□□ -0.78
NEK4-202ENST00000383721 PRO0461Q9UI25 63 aa10.21□□□□□ -0.78
NEK4-202ENST00000383721 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.78
NEK4-202ENST00000383721 MTURNQ8N3F0 131 aa10.21□□□□□ -0.78
NEK4-202ENST00000383721 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.78
NEK4-202ENST00000383721 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 A6NJY4 79 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 P0DMU3 169 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 FAM231AP0DMU4 169 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 FAM231CP0DMU5 169 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 HOXD3P31249 432 aaPredicted RBP10.2□□□□□ -0.78
NEK4-202ENST00000383721 NSUN5P1Q3KNT7 163 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 TEX29Q8N6K0 151 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 CRLF1O75462 422 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 SH2D6Q7Z4S9 175 aa10.2□□□□□ -0.78
NEK4-202ENST00000383721 TRPT1Q86TN4 253 aaKnown RBP10.2□□□□□ -0.78
NEK4-202ENST00000383721 MRPL16Q9NX20 251 aaKnown RBP10.2□□□□□ -0.78
NEK4-202ENST00000383721 RHOHQ15669 191 aa10.19□□□□□ -0.78
NEK4-202ENST00000383721 ETDBQ3ZM63 59 aa10.19□□□□□ -0.78
NEK4-202ENST00000383721 Q6YL49 198 aa10.19□□□□□ -0.78
NEK4-202ENST00000383721 AMELXQ99217 191 aa10.19□□□□□ -0.78
NEK4-202ENST00000383721 ESM1Q9NQ30 184 aa10.19□□□□□ -0.78
NEK4-202ENST00000383721 VPREB3Q9UKI3 123 aa10.19□□□□□ -0.78
NEK4-202ENST00000383721 ELANEP08246 267 aa10.18□□□□□ -0.78
NEK4-202ENST00000383721 RBMY1A1P0DJD3 496 aaKnown RBP10.18□□□□□ -0.78
NEK4-202ENST00000383721 RBMY1CP0DJD4 496 aa10.18□□□□□ -0.78
NEK4-202ENST00000383721 RBMY1FQ15415 496 aaKnown RBP10.18□□□□□ -0.78
NEK4-202ENST00000383721 RNF152Q8N8N0 203 aa10.18□□□□□ -0.78
NEK4-202ENST00000383721 ZNF702PQ9H963 129 aa10.18□□□□□ -0.78
NEK4-202ENST00000383721 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
NEK4-202ENST00000383721 TSPAN13O95857 204 aa10.17□□□□□ -0.78
NEK4-202ENST00000383721 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
NEK4-202ENST00000383721 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
NEK4-202ENST00000383721 J3QQQ9 107 aa10.17□□□□□ -0.78
NEK4-202ENST00000383721 SLC25A29Q8N8R3 303 aa10.17□□□□□ -0.78
NEK4-202ENST00000383721 TRGV11A0A075B6L2 103 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 I3L3M4 83 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 APOMO95445 188 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 IGHV3-30P01768 117 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 IGHV3-30-5P0DP03 117 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 TCTEX1D4Q5JR98 221 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 DNAJC9-AS1A6NH13 148 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 KNCNA6PVL3 124 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 SFTA2Q6UW10 78 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 NDUFA11Q86Y39 141 aa10.16□□□□□ -0.78
NEK4-202ENST00000383721 SPAG8Q99932 426 aaPredicted RBP10.15□□□□□ -0.78
NEK4-202ENST00000383721 TMEM223A0PJW6 202 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms