RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 ANKRD11Q6UB99 2663 aaPredicted RBP4.22□□□□□ -1.73
GEN1-202ENST00000381254 C5orf56Q8N8D9 126 aa4.22□□□□□ -1.73
GEN1-202ENST00000381254 C4orf3Q8WVX3 66 aa4.22□□□□□ -1.73
GEN1-202ENST00000381254 USF3Q68DE3 2245 aa4.22□□□□□ -1.73
GEN1-202ENST00000381254 IGLV2-8P01709 118 aa4.22□□□□□ -1.73
GEN1-202ENST00000381254 CCL18P55774 89 aa4.22□□□□□ -1.73
GEN1-202ENST00000381254 MALRD1Q5VYJ5 2156 aa4.22□□□□□ -1.73
GEN1-202ENST00000381254 GTSF1Q8WW33 167 aa4.22□□□□□ -1.73
GEN1-202ENST00000381254 TP53BP1Q12888 1972 aaPredicted RBP4.21□□□□□ -1.73
GEN1-202ENST00000381254 FOXI1Q12951 378 aa4.21□□□□□ -1.73
GEN1-202ENST00000381254 S4R3C0 116 aa4.21□□□□□ -1.73
GEN1-202ENST00000381254 ZFYVE26Q68DK2 2539 aa4.21□□□□□ -1.73
GEN1-202ENST00000381254 DSCAMO60469 2012 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 TRBV30A0A0K0K1B3 111 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 A6NDX4 124 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 J3KT08 172 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 TMEM256-PLSCR3K7ERE1 68 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 MRPS36P82909 103 aaKnown RBP4.21□□□□□ -1.74
GEN1-202ENST00000381254 NKAPP1Q8N9T2 125 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 IGKV1D-37A0A075B6S9 117 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 NTN5Q8WTR8 489 aaPredicted RBP4.21□□□□□ -1.74
GEN1-202ENST00000381254 FANCD2OSQ96PS1 177 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 TRAV13-1A0A0B4J241 112 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 TRBV27A0A0K0K1C4 114 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 K7EQD1 137 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 C14orf177Q52M58 125 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 ZNRF2Q8NHG8 242 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 C8orf49Q96NF6 230 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 ZNF106Q9H2Y7 1883 aaKnown RBP4.21□□□□□ -1.74
GEN1-202ENST00000381254 HELZ2Q9BYK8 2649 aaKnown RBP4.21□□□□□ -1.74
GEN1-202ENST00000381254 F6UB75 175 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 NFE4Q86UQ8 179 aa4.21□□□□□ -1.74
GEN1-202ENST00000381254 CCDC168Q8NDH2 2452 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 TRBV7-3A0A075B6L6 115 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 ANKRD39Q53RE8 183 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 TNRC18O15417 2968 aaPredicted RBP4.2□□□□□ -1.74
GEN1-202ENST00000381254 C11orf45Q8TAV5 145 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 LYRM9A8MSI8 78 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 COX7A2LO14548 114 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 SPRY2O43597 315 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 SPART-AS1P0CW21 52 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 MIAQ16674 131 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 CCDC140Q96MF4 163 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 FAM110AQ9BQ89 295 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 ICOSQ9Y6W8 199 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 CHD3Q12873 2000 aaKnown RBP4.2□□□□□ -1.74
GEN1-202ENST00000381254 LY6LH3BQJ8 138 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 UFSP1Q6NVU6 142 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 C1orf229Q6ZS94 237 aaPredicted RBP4.2□□□□□ -1.74
GEN1-202ENST00000381254 LINC01561Q8N1V8 128 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 TMEM263Q8WUH6 116 aaKnown RBP4.2□□□□□ -1.74
GEN1-202ENST00000381254 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 A0A087WWL8 130 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 NDUFC2O95298 119 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 IGHV3-53P01767 116 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 BAALC-AS2P0C853 105 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 DKK2Q9UBU2 259 aa4.2□□□□□ -1.74
GEN1-202ENST00000381254 IGKV1OR2-108A0A075B7D4 117 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 SMKR1H3BMG3 65 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 PROP1O75360 226 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 SUMO4Q6EEV6 95 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 Q8N6K4 173 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 MRPL36Q9P0J6 103 aaKnown RBP4.19□□□□□ -1.74
GEN1-202ENST00000381254 LINC00527Q9UJ94 153 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 HECTD1Q9ULT8 2610 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 SPINK13Q1W4C9 94 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 CRIP3Q6Q6R5 217 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 COX7B2Q8TF08 81 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 ROS1P08922 2347 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 TRBV6-4A0A1B0GX49 114 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 G3V318 75 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 K7EQG2 157 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 UQCRQO14949 82 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 NDUFA1O15239 70 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
GEN1-202ENST00000381254 NEXN-AS1Q8NBZ9 246 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 PPDPFQ9H3Y8 114 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
GEN1-202ENST00000381254 IGKV3OR2-268A0A0C4DH90 116 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 BCE1O60756 84 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 MP68P56378 58 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 NDPQ00604 133 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 LINC00467Q9BRT7 94 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 Q9H8V8 135 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 PRO0255Q9UI72 69 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 A0A1B0GW54 56 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 TPSG1Q9NRR2 321 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 CD24P25063 80 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 U3KQE9 123 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 V9GYY9 64 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 IGHV3OR16-8A0A075B7F1 116 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 BAALCQ8WXS3 180 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 NDUFB1O75438 58 aa4.18□□□□□ -1.74
GEN1-202ENST00000381254 PRB3Q04118 309 aaPredicted RBP4.18□□□□□ -1.74
GEN1-202ENST00000381254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.18□□□□□ -1.747e-14■■■■■ 51.9
GEN1-202ENST00000381254 USP9XQ93008 2570 aaPredicted RBP4.17□□□□□ -1.74
GEN1-202ENST00000381254 TFF1P04155 84 aa4.17□□□□□ -1.74
GEN1-202ENST00000381254 BRWD1-AS2P59051 145 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms