RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 H3BVH4 76 aa8.67□□□□□ -1.02
RPAIN-202ENST00000381208 S100A9P06702 114 aaKnown RBP8.67□□□□□ -1.02
RPAIN-202ENST00000381208 ARMS2P0C7Q2 107 aa8.67□□□□□ -1.02
RPAIN-202ENST00000381208 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
RPAIN-202ENST00000381208 RMI2Q96E14 147 aa8.67□□□□□ -1.02
RPAIN-202ENST00000381208 ZC2HC1AQ96GY0 325 aa8.67□□□□□ -1.02
RPAIN-202ENST00000381208 MANBALQ9NQG1 85 aa8.67□□□□□ -1.02
RPAIN-202ENST00000381208 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
RPAIN-202ENST00000381208 TRBV10-1A0A0K0K1A3 114 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 SH2D1AO60880 128 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 BCL2P10415 239 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 CRIP1P50238 77 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 ZNF674Q2M3X9 581 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 Q5VSD8 79 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 CST9LP1Q5W188 147 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 Q6ZSN1 163 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 ZFP82Q8N141 532 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 CLRN3Q8NCR9 226 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 CHCHD7Q9BUK0 85 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 VAX2Q9UIW0 290 aa8.66□□□□□ -1.02
RPAIN-202ENST00000381208 C9JQL5 133 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 M0R036 132 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 LTAP01374 205 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 AKR1C3P42330 323 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 CCL20P78556 96 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 ELOBQ15370 118 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 RHEBQ15382 184 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 ATRAIDQ6UW56 229 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 SFRP2Q96HF1 295 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 GNG13Q9P2W3 67 aa8.65□□□□□ -1.02
RPAIN-202ENST00000381208 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-202ENST00000381208 PAGE4O60829 102 aa8.64□□□□□ -1.03
RPAIN-202ENST00000381208 SRP19P09132 144 aaKnown RBP8.64□□□□□ -1.03
RPAIN-202ENST00000381208 FAM74A4Q5TZK3 123 aa8.64□□□□□ -1.03
RPAIN-202ENST00000381208 KCNIP4Q6PIL6 250 aa8.64□□□□□ -1.03
RPAIN-202ENST00000381208 C14orf178Q8N769 122 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-202ENST00000381208 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
RPAIN-202ENST00000381208 JPT2Q9H910 190 aa8.64□□□□□ -1.03
RPAIN-202ENST00000381208 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
RPAIN-202ENST00000381208 FAT1Q14517 4588 aa8.64□□□□□ -1.03
RPAIN-202ENST00000381208 GRIFINA4D1Z8 144 aa8.63□□□□□ -1.03
RPAIN-202ENST00000381208 CXCL1P09341 107 aa8.63□□□□□ -1.03
RPAIN-202ENST00000381208 RPL36AP83881 106 aaKnown RBP8.63□□□□□ -1.03
RPAIN-202ENST00000381208 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.63□□□□□ -1.03
RPAIN-202ENST00000381208 RPL36ALQ969Q0 106 aaKnown RBP8.63□□□□□ -1.03
RPAIN-202ENST00000381208 M0R381 172 aa8.62□□□□□ -1.03
RPAIN-202ENST00000381208 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-202ENST00000381208 PNRC1Q12796 327 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-202ENST00000381208 FAM74A3Q4VXF1 159 aa8.62□□□□□ -1.03
RPAIN-202ENST00000381208 NIT1Q86X76 327 aa8.62□□□□□ -1.03
RPAIN-202ENST00000381208 SMCO4Q9NRQ5 59 aa8.62□□□□□ -1.03
RPAIN-202ENST00000381208 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 A0A087WWL8 130 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 A0A087WX48 190 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 TMEM250H0YL14 139 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
RPAIN-202ENST00000381208 DAZ3Q9NR90 486 aaKnown RBP8.61□□□□□ -1.03
RPAIN-202ENST00000381208 TMSB15BA0A087X1C1 80 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
RPAIN-202ENST00000381208 RAB4BP61018 213 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 PKIAP61925 76 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 ODF1Q14990 250 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 Q8N976 141 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 OR10G8Q8NGN5 311 aa8.61□□□□□ -1.03
RPAIN-202ENST00000381208 VPS13BQ7Z7G8 4022 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 PDE6DO43924 150 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 Q0VG73 95 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 WDR73Q6P4I2 378 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 BAGE2Q86Y30 109 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 C15orf54Q8N8G6 183 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 RPS10P5Q9NQ39 176 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 Q9UF83 564 aa8.6□□□□□ -1.03
RPAIN-202ENST00000381208 IGKV2D-24A0A075B6R9 120 aa8.59□□□□□ -1.03
RPAIN-202ENST00000381208 C7orf77A4D0Y5 90 aa8.59□□□□□ -1.03
RPAIN-202ENST00000381208 CEBPGP53567 150 aa8.59□□□□□ -1.03
RPAIN-202ENST00000381208 UBE2D3P61077 147 aa8.59□□□□□ -1.03
RPAIN-202ENST00000381208 UBE2D2P62837 147 aa8.59□□□□□ -1.03
RPAIN-202ENST00000381208 TMEM97Q5BJF2 176 aa8.59□□□□□ -1.03
RPAIN-202ENST00000381208 MLST8Q9BVC4 326 aa8.59□□□□□ -1.03
RPAIN-202ENST00000381208 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
RPAIN-202ENST00000381208 SNAI2O43623 268 aa8.58□□□□□ -1.04
RPAIN-202ENST00000381208 OR5AL1P0C617 328 aa8.58□□□□□ -1.04
RPAIN-202ENST00000381208 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
RPAIN-202ENST00000381208 Q6ZSA8 131 aa8.58□□□□□ -1.04
RPAIN-202ENST00000381208 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
RPAIN-202ENST00000381208 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
RPAIN-202ENST00000381208 TRBV6-8A0A0A6YYG3 113 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 ZNF727A8MUV8 499 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
RPAIN-202ENST00000381208 WFDC2Q14508 124 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 ZNF56Q15929 161 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 BAALCQ8WXS3 180 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 NAT8Q9UHE5 227 aa8.57□□□□□ -1.04
RPAIN-202ENST00000381208 TMEM262E9PQX1 116 aa8.56□□□□□ -1.04
RPAIN-202ENST00000381208 SMIM17P0DL12 118 aa8.56□□□□□ -1.04
RPAIN-202ENST00000381208 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms