RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 CITED1Q99966 193 aa10.06□□□□□ -0.8
EIF3CL-201ENST00000380876 KIF25-AS1Q9Y6Z4 181 aa10.06□□□□□ -0.8
EIF3CL-201ENST00000380876 TRIAP1O43715 76 aa10.06□□□□□ -0.8
EIF3CL-201ENST00000380876 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
EIF3CL-201ENST00000380876 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
EIF3CL-201ENST00000380876 RHPN1-AS1Q9BWJ2 59 aa10.06□□□□□ -0.8
EIF3CL-201ENST00000380876 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
EIF3CL-201ENST00000380876 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
EIF3CL-201ENST00000380876 SIRPDQ9H106 197 aa10.05□□□□□ -0.8
EIF3CL-201ENST00000380876 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
EIF3CL-201ENST00000380876 MRPL53Q96EL3 112 aaKnown RBP10.05□□□□□ -0.8
EIF3CL-201ENST00000380876 MINOS1-NBL1R4GNA1 71 aa10.05□□□□□ -0.8
EIF3CL-201ENST00000380876 OVOL1O14753 267 aa10.04□□□□□ -0.8
EIF3CL-201ENST00000380876 C5orf56Q8N8D9 126 aa10.04□□□□□ -0.8
EIF3CL-201ENST00000380876 RHODO00212 210 aa10.04□□□□□ -0.8
EIF3CL-201ENST00000380876 PROK1P58294 105 aa10.04□□□□□ -0.8
EIF3CL-201ENST00000380876 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 UBE2E1P51965 193 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 ADAMTSL4-AS1Q5T5F5 129 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 C2orf82Q6UX34 121 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 Q9UF83 564 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 CENPEQ02224 2701 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 IFITM1P13164 125 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 BPESC1Q9GZL8 116 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 SOCS3O14543 225 aa10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 USP9YO00507 2555 aaPredicted RBP10.03□□□□□ -0.8
EIF3CL-201ENST00000380876 GAGE12JA6NER3 117 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 GAGE7O76087 117 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 BLCAPP62952 87 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 HERV-K104P63124 156 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 GAGE4Q13068 117 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 ATXN8Q156A1 80 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 SHISA2Q6UWI4 295 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 TMEM95Q3KNT9 176 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 TMEM141Q96I45 108 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 ABCA2Q9BZC7 2435 aa10.02□□□□□ -0.81
EIF3CL-201ENST00000380876 IGHV1-69DA0A0B4J2H0 117 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 NPFFO15130 113 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 SPINK13Q1W4C9 94 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 TIMM17AQ99595 171 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 SPTBN4Q9H254 2564 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 ZANQ9Y493 2812 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 OOSP1A8MZH6 123 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 H3BMM0 161 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 LEPROTO15243 131 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 PPP1R17O96001 155 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 UBE2WQ96B02 151 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 LENEPQ9Y5L5 61 aa10.01□□□□□ -0.81
EIF3CL-201ENST00000380876 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
EIF3CL-201ENST00000380876 DUX5Q96PT3 197 aa10□□□□□ -0.81
EIF3CL-201ENST00000380876 SETD2Q9BYW2 2564 aaPredicted RBP9.99□□□□□ -0.81
EIF3CL-201ENST00000380876 IGHV4OR15-8A0A075B7B6 117 aa9.99□□□□□ -0.81
EIF3CL-201ENST00000380876 A0A087WW49 117 aa9.99□□□□□ -0.81
EIF3CL-201ENST00000380876 H7C423 109 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 M0QY20 66 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 CD28P10747 220 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 FOXC1Q12948 553 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 POLQO75417 2590 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 TRBV27A0A0K0K1C4 114 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 C11orf71Q6IPW1 123 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 TRBV7-9A0A0J9YWB2 115 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 MEIG1Q5JSS6 88 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 C10orf99Q6UWK7 81 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
EIF3CL-201ENST00000380876 MYO9AB2RTY4 2548 aa9.97□□□□□ -0.81
EIF3CL-201ENST00000380876 ADORA2A-AS1P86434 159 aa9.97□□□□□ -0.81
EIF3CL-201ENST00000380876 ICOSQ9Y6W8 199 aa9.97□□□□□ -0.81
EIF3CL-201ENST00000380876 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
EIF3CL-201ENST00000380876 FAM19A4Q96LR4 140 aa9.97□□□□□ -0.81
EIF3CL-201ENST00000380876 UTP20O75691 2785 aaKnown RBP9.97□□□□□ -0.81
EIF3CL-201ENST00000380876 WNK1Q9H4A3 2382 aa9.97□□□□□ -0.81
EIF3CL-201ENST00000380876 NDUFA4O00483 81 aa9.96□□□□□ -0.81
EIF3CL-201ENST00000380876 C20orf203Q8NBC4 194 aa9.96□□□□□ -0.81
EIF3CL-201ENST00000380876 A0A0B4J2C4 111 aa9.96□□□□□ -0.82
EIF3CL-201ENST00000380876 M0R2P5 195 aa9.96□□□□□ -0.82
EIF3CL-201ENST00000380876 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.82
EIF3CL-201ENST00000380876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.82
EIF3CL-201ENST00000380876 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.82
EIF3CL-201ENST00000380876 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.82
EIF3CL-201ENST00000380876 MOB4Q9Y3A3 225 aa9.96□□□□□ -0.82
EIF3CL-201ENST00000380876 H3BUX3 64 aa9.95□□□□□ -0.82
EIF3CL-201ENST00000380876 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
EIF3CL-201ENST00000380876 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
EIF3CL-201ENST00000380876 KLLNB2CW77 178 aa9.95□□□□□ -0.82
EIF3CL-201ENST00000380876 LGALS9O00182 355 aa9.95□□□□□ -0.82
EIF3CL-201ENST00000380876 IGHV4-38-2P0DP08 117 aa9.95□□□□□ -0.82
EIF3CL-201ENST00000380876 ITPR1Q14643 2758 aa9.95□□□□□ -0.82
EIF3CL-201ENST00000380876 FAM223BA6NKX1 122 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms