RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 SPXQ9BT56 116 aa10.74□□□□□ -0.69
RAB3IP-203ENST00000378809 MRPL35Q9NZE8 188 aaKnown RBP10.74□□□□□ -0.69
RAB3IP-203ENST00000378809 TP53TG1Q9Y2A0 90 aa10.74□□□□□ -0.69
RAB3IP-203ENST00000378809 MRPS16Q9Y3D3 137 aaKnown RBP10.74□□□□□ -0.69
RAB3IP-203ENST00000378809 HIVEP1P15822 2718 aa10.74□□□□□ -0.69
RAB3IP-203ENST00000378809 FN1P02751 2386 aaKnown RBP10.73□□□□□ -0.69
RAB3IP-203ENST00000378809 TRBV27A0A0K0K1C4 114 aa10.73□□□□□ -0.69
RAB3IP-203ENST00000378809 G0S2P27469 103 aa10.73□□□□□ -0.69
RAB3IP-203ENST00000378809 NMUP48645 174 aa10.73□□□□□ -0.69
RAB3IP-203ENST00000378809 P0DMU3 169 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 FAM231AP0DMU4 169 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 FAM231CP0DMU5 169 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 COX8AP10176 69 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 HINT1P49773 126 aaPredicted RBP10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 CFAP126Q5VTH2 177 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 FAM110AQ9BQ89 295 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 A0A087WX48 190 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 ERASQ7Z444 233 aa10.72□□□□□ -0.69
RAB3IP-203ENST00000378809 PIK3CD-AS1Q5SR53 167 aa10.71□□□□□ -0.69
RAB3IP-203ENST00000378809 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-203ENST00000378809 ZMAT4Q9H898 229 aa10.71□□□□□ -0.69
RAB3IP-203ENST00000378809 TRGV1A0A0A0MS02 117 aa10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 BAALCQ8WXS3 180 aa10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 C2CD3Q4AC94 2353 aa10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 I3L3M4 83 aa10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 PTH2Q96A98 100 aa10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 CHTOPQ9Y3Y2 248 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 TNFRSF18Q9Y5U5 241 aa10.7□□□□□ -0.7
RAB3IP-203ENST00000378809 TRAV12-1A0A0B4J245 112 aa10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 RHODO00212 210 aa10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 GIG44P09565 113 aaPredicted RBP10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 UFSP1Q6NVU6 142 aa10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 GTSCR1Q86UQ5 136 aa10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 RNASE8Q8TDE3 154 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 TMEM263Q8WUH6 116 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 HHLA3Q9XRX5 114 aa10.69□□□□□ -0.7
RAB3IP-203ENST00000378809 F8VRH5 84 aa10.68□□□□□ -0.7
RAB3IP-203ENST00000378809 PLNP26678 52 aa10.68□□□□□ -0.7
RAB3IP-203ENST00000378809 LINC01549A6NIU2 74 aa10.68□□□□□ -0.7
RAB3IP-203ENST00000378809 Q6ZSN1 163 aa10.68□□□□□ -0.7
RAB3IP-203ENST00000378809 TSHBP01222 138 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 RIPPLY3P57055 190 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 RHOHQ15669 191 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 PCP2Q8IVA1 136 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 OR4C5Q8NGB2 326 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 SPATA3Q8NHX4 192 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 JMJD1CQ15652 2540 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 PRSS29PA6NIE9 313 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 RS1O15537 224 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 MPV17L2Q567V2 206 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 EDA2RQ9HAV5 297 aa10.67□□□□□ -0.7
RAB3IP-203ENST00000378809 FGF6P10767 208 aa10.66□□□□□ -0.7
RAB3IP-203ENST00000378809 C9orf66Q5T8R8 295 aa10.66□□□□□ -0.7
RAB3IP-203ENST00000378809 IL17DQ8TAD2 202 aa10.66□□□□□ -0.7
RAB3IP-203ENST00000378809 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
RAB3IP-203ENST00000378809 Q9UF83 564 aa10.66□□□□□ -0.7
RAB3IP-203ENST00000378809 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
RAB3IP-203ENST00000378809 IGIPA6NJ69 53 aa10.65□□□□□ -0.7
RAB3IP-203ENST00000378809 IGHV3-53P01767 116 aa10.65□□□□□ -0.7
RAB3IP-203ENST00000378809 INSL3P51460 131 aa10.65□□□□□ -0.7
RAB3IP-203ENST00000378809 Q6ZTI0 123 aa10.65□□□□□ -0.7
RAB3IP-203ENST00000378809 BOD1L2Q8IYS8 172 aa10.65□□□□□ -0.7
RAB3IP-203ENST00000378809 TMEM141Q96I45 108 aa10.65□□□□□ -0.7
RAB3IP-203ENST00000378809 C2orf91Q6ZV80 131 aa10.65□□□□□ -0.71
RAB3IP-203ENST00000378809 C16orf74Q96GX8 76 aa10.65□□□□□ -0.71
RAB3IP-203ENST00000378809 TIMM17AQ99595 171 aa10.65□□□□□ -0.71
RAB3IP-203ENST00000378809 CITED1Q99966 193 aa10.65□□□□□ -0.71
RAB3IP-203ENST00000378809 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
RAB3IP-203ENST00000378809 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 ZNF479Q96JC4 524 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 TTTY13Q9BZ97 58 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 EMP1P54849 157 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 PMVKQ15126 192 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 TMEM97Q5BJF2 176 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 C12orf54Q6X4T0 127 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 C20orf203Q8NBC4 194 aa10.63□□□□□ -0.71
RAB3IP-203ENST00000378809 IGHV3-38A0A0C4DH36 116 aa10.62□□□□□ -0.71
RAB3IP-203ENST00000378809 PHLDA1Q8WV24 401 aaPredicted RBP10.62□□□□□ -0.71
RAB3IP-203ENST00000378809 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
RAB3IP-203ENST00000378809 TRAV8-6A0A0B4J262 113 aa10.62□□□□□ -0.71
RAB3IP-203ENST00000378809 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
RAB3IP-203ENST00000378809 OPRPNQ99935 248 aaPredicted RBP10.62□□□□□ -0.71
RAB3IP-203ENST00000378809 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
RAB3IP-203ENST00000378809 GAGE12BA1L429 117 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 DLEU1O43261 78 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 GAGE7O76087 117 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 GAGE12FP0CL80 117 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 GAGE12GP0CL81 117 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 GAGE12IP0CL82 117 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 BVES-AS1Q5T3Y7 98 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 ZMAT5Q9UDW3 170 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 FLNBO75369 2602 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-203ENST00000378809 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms