RNA–Protein interactions for RNA: ENST00000378123.4

PCDHA8-201, Transcript of protocadherin alpha 8, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA8, Length 2,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-201ENST00000378123 SRSF9Q13242 221 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCDHA8-201ENST00000378123 WFDC2Q14508 124 aa13.19□□□□□ -0.3
PCDHA8-201ENST00000378123 TEX48A0A1B0GUV7 120 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 G3V4G9 280 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 DEFB131AP59861 70 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 SAMD13Q5VXD3 122 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 FOXI2Q6ZQN5 318 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 Q9UF83 564 aa13.18□□□□□ -0.3
PCDHA8-201ENST00000378123 Q6YL49 198 aa13.17□□□□□ -0.3
PCDHA8-201ENST00000378123 IGHV4-31P0DP07 118 aa13.17□□□□□ -0.3
PCDHA8-201ENST00000378123 KHDC1LQ5JSQ8 128 aa13.17□□□□□ -0.3
PCDHA8-201ENST00000378123 WNK1Q9H4A3 2382 aa13.17□□□□□ -0.3
PCDHA8-201ENST00000378123 RPL32P62910 135 aaKnown RBP13.16□□□□□ -0.3
PCDHA8-201ENST00000378123 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
PCDHA8-201ENST00000378123 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
PCDHA8-201ENST00000378123 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
PCDHA8-201ENST00000378123 UBR5O95071 2799 aaPredicted RBP13.16□□□□□ -0.3
PCDHA8-201ENST00000378123 CCDC168Q8NDH2 2452 aa13.15□□□□□ -0.3
PCDHA8-201ENST00000378123 PGPEP1Q9NXJ5 209 aa13.15□□□□□ -0.3
PCDHA8-201ENST00000378123 ELANEP08246 267 aa13.15□□□□□ -0.3
PCDHA8-201ENST00000378123 SH2D6Q7Z4S9 175 aa13.15□□□□□ -0.3
PCDHA8-201ENST00000378123 NOTCH3Q9UM47 2321 aa13.15□□□□□ -0.3
PCDHA8-201ENST00000378123 NIPBLQ6KC79 2804 aaeCLIP13.15□□□□□ -0.3
PCDHA8-201ENST00000378123 TRBV6-5A0A0K0K1A5 114 aa13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 APOMO95445 188 aa13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 CR1P17927 2039 aa13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 J3QLI3 93 aa13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 TMEM141Q96I45 108 aa13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 TIMM17AQ99595 171 aa13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 PRRC2AP48634 2157 aaKnown RBP13.14□□□□□ -0.31
PCDHA8-201ENST00000378123 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
PCDHA8-201ENST00000378123 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
PCDHA8-201ENST00000378123 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
PCDHA8-201ENST00000378123 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
PCDHA8-201ENST00000378123 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
PCDHA8-201ENST00000378123 AKAP9Q99996 3911 aa13.13□□□□□ -0.31
PCDHA8-201ENST00000378123 CEMP1Q6PRD7 247 aaPredicted RBP13.13□□□□□ -0.31
PCDHA8-201ENST00000378123 APCP25054 2843 aa13.12□□□□□ -0.31
PCDHA8-201ENST00000378123 A0A0J9YY99 117 aa13.12□□□□□ -0.31
PCDHA8-201ENST00000378123 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
PCDHA8-201ENST00000378123 TRPT1Q86TN4 253 aaKnown RBP13.12□□□□□ -0.31
PCDHA8-201ENST00000378123 TMEM61Q8N0U2 210 aa13.12□□□□□ -0.31
PCDHA8-201ENST00000378123 A0A1B0GWB2 263 aa13.12□□□□□ -0.31
PCDHA8-201ENST00000378123 FSHBP01225 129 aa13.11□□□□□ -0.31
PCDHA8-201ENST00000378123 HERVK_113P61574 105 aa13.11□□□□□ -0.31
PCDHA8-201ENST00000378123 ETDBQ3ZM63 59 aa13.11□□□□□ -0.31
PCDHA8-201ENST00000378123 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
PCDHA8-201ENST00000378123 LINC01619G3V211 115 aa13.1□□□□□ -0.31
PCDHA8-201ENST00000378123 A0A0J9YXV3 536 aa13.1□□□□□ -0.31
PCDHA8-201ENST00000378123 Q5PR19 223 aa13.1□□□□□ -0.31
PCDHA8-201ENST00000378123 Q6ZSN1 163 aa13.1□□□□□ -0.31
PCDHA8-201ENST00000378123 C20orf203Q8NBC4 194 aa13.1□□□□□ -0.31
PCDHA8-201ENST00000378123 I3L3M4 83 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 NACAE9PAV3 2078 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 LOC107984156A0A0G2JMH3 177 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 H3BMM0 161 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 J3QQQ9 107 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 ARL17AQ8IVW1 177 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 SPAG8Q99932 426 aaPredicted RBP13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 TRGV11A0A075B6L2 103 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 NSUN5P1Q3KNT7 163 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 PAPPA-AS1Q5QFB9 102 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 DLX4Q92988 240 aaPredicted RBP13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 AMELXQ99217 191 aa13.09□□□□□ -0.31
PCDHA8-201ENST00000378123 ITPR3Q14573 2671 aa13.08□□□□□ -0.32
PCDHA8-201ENST00000378123 Q96MF0 132 aa13.08□□□□□ -0.32
PCDHA8-201ENST00000378123 SPANXB1Q9NS25 103 aaPredicted RBP13.08□□□□□ -0.32
PCDHA8-201ENST00000378123 TSPAN13O95857 204 aa13.08□□□□□ -0.32
PCDHA8-201ENST00000378123 GAGE13Q4V321 117 aa13.08□□□□□ -0.32
PCDHA8-201ENST00000378123 IGLV4-3A0A075B6K6 122 aa13.07□□□□□ -0.32
PCDHA8-201ENST00000378123 ADARB2-AS1A8MUL3 147 aa13.07□□□□□ -0.32
PCDHA8-201ENST00000378123 INSL3P51460 131 aa13.07□□□□□ -0.32
PCDHA8-201ENST00000378123 UBE2D1P51668 147 aa13.07□□□□□ -0.32
PCDHA8-201ENST00000378123 F8W1H4 67 aa13.07□□□□□ -0.32
PCDHA8-201ENST00000378123 LGALS3P17931 250 aaKnown RBP13.06□□□□□ -0.32
PCDHA8-201ENST00000378123 COTL1Q14019 142 aa13.06□□□□□ -0.32
PCDHA8-201ENST00000378123 RHOHQ15669 191 aa13.06□□□□□ -0.32
PCDHA8-201ENST00000378123 CD28P10747 220 aa13.06□□□□□ -0.32
PCDHA8-201ENST00000378123 VCX2Q9H322 139 aa13.06□□□□□ -0.32
PCDHA8-201ENST00000378123 PRO0461Q9UI25 63 aa13.06□□□□□ -0.32
PCDHA8-201ENST00000378123 IGHV3-38A0A0C4DH36 116 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 IGHV3-30P01768 117 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 IGHV3-30-5P0DP03 117 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 RNF152Q8N8N0 203 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 SPXQ9BT56 116 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 JMJD1CQ15652 2540 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 TMEM238LA0A1B0GVL6 79 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 A6NJY4 79 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 PSMB2P49721 201 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 SLC25A29Q8N8R3 303 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 FAM104AQ969W3 186 aa13.05□□□□□ -0.32
PCDHA8-201ENST00000378123 A0A1W2PRX2 142 aa13.04□□□□□ -0.32
PCDHA8-201ENST00000378123 TMEM223A0PJW6 202 aa13.04□□□□□ -0.32
PCDHA8-201ENST00000378123 CFC1BP0CG36 223 aa13.04□□□□□ -0.32
PCDHA8-201ENST00000378123 CFC1P0CG37 223 aa13.04□□□□□ -0.32
PCDHA8-201ENST00000378123 NDUFA11Q86Y39 141 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms