RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 IMUPQ9GZP8 106 aa6.6□□□□□ -1.35
PCDH9-202ENST00000377865 M0QY20 66 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 C10orf105Q8TEF2 133 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 IGHV4-61A0A0C4DH41 118 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 JMJD7-PLA2G4BH0Y9G9 81 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 NDUFA1O15239 70 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 HTN3P15516 51 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 DEFB1P60022 68 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 BLCAPP62952 87 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 M0QXV9 152 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 XGP55808 180 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 CFHR3Q02985 330 aa6.59□□□□□ -1.35
PCDH9-202ENST00000377865 UQCRQO14949 82 aa6.59□□□□□ -1.36
PCDH9-202ENST00000377865 GAS8-AS1O95177 125 aa6.59□□□□□ -1.36
PCDH9-202ENST00000377865 UBE2D1P51668 147 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 DAND5Q8N907 189 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 IGLV2-18A0A075B6J9 118 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 TRAV25A0A0B4J276 109 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 TRBV10-1A0A0K0K1A3 114 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 POLR2KP53803 58 aaKnown RBP6.58□□□□□ -1.36
PCDH9-202ENST00000377865 RAI1Q7Z5J4 1906 aaPredicted RBP6.58□□□□□ -1.36
PCDH9-202ENST00000377865 A0A1B0GX51 115 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 CLPSL1A2RUU4 121 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 RNASE3P12724 160 aaKnown RBP6.58□□□□□ -1.36
PCDH9-202ENST00000377865 TIRAPP58753 221 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 UBE2D3P61077 147 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 UBE2D2P62837 147 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 C11orf71Q6IPW1 123 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 CEP290O15078 2479 aa6.58□□□□□ -1.36
PCDH9-202ENST00000377865 MED13Q9UHV7 2174 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 PRR9Q5T870 116 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 NOP10Q9NPE3 64 aaKnown RBP6.57□□□□□ -1.36
PCDH9-202ENST00000377865 DEFB130BP0DP73 79 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 DEFB130AP0DP74 79 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 INTS1Q8N201 2190 aaKnown RBP6.57□□□□□ -1.36
PCDH9-202ENST00000377865 LINC01548A6NM66 108 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 C3orf22Q8N5N4 141 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 KLLNB2CW77 178 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 RNF223E7ERA6 249 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 TSHBP01222 138 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 SLURP1P55000 103 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 K7EQG2 157 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 INSL3P51460 131 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 LMO4P61968 165 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 MRGPRG-AS1Q2M3A8 158 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 HIST2H2BCQ6DN03 193 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 HIST2H2BDQ6DRA6 164 aa6.57□□□□□ -1.36
PCDH9-202ENST00000377865 TANC2Q9HCD6 1990 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 IGIPA6NJ69 53 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 H7C423 109 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 TMEM61Q8N0U2 210 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 C9orf85Q96MD7 179 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 TRAV4A0A0B4J268 109 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 FAM240AA0A1B0GVK7 77 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 C4orf3Q8WVX3 66 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 GTF3C1Q12789 2109 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 LST1O00453 97 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 NXPH4O95158 308 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 HAMPP81172 84 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 PRO3102Q9H379 93 aa6.56□□□□□ -1.36
PCDH9-202ENST00000377865 hADV29S1A0JD25 119 aa6.55□□□□□ -1.36
PCDH9-202ENST00000377865 CXCL5P42830 114 aa6.55□□□□□ -1.36
PCDH9-202ENST00000377865 IGLV4-69A0A075B6H9 119 aa6.55□□□□□ -1.36
PCDH9-202ENST00000377865 APRG1Q8IVJ8 170 aa6.55□□□□□ -1.36
PCDH9-202ENST00000377865 LINC00308Q8TCZ7 52 aa6.55□□□□□ -1.36
PCDH9-202ENST00000377865 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
PCDH9-202ENST00000377865 Q6ZS46 218 aa6.55□□□□□ -1.36
PCDH9-202ENST00000377865 IGHV4-30-2A0A087WSY4 118 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 ATP5EP2Q5VTU8 51 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
PCDH9-202ENST00000377865 MALRD1Q5VYJ5 2156 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 F8W735 103 aaPredicted RBP6.54□□□□□ -1.36
PCDH9-202ENST00000377865 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 ZDBF2Q9HCK1 2354 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 TMEM256-PLSCR3K7ERE1 68 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
PCDH9-202ENST00000377865 LECT2O14960 151 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 XCL1P47992 114 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 DAD1P61803 113 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 MRPS36P82909 103 aaKnown RBP6.53□□□□□ -1.36
PCDH9-202ENST00000377865 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 PSMB8P28062 276 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 TRIOBPQ9H2D6 2365 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 CRIP2P52943 208 aaPredicted RBP6.53□□□□□ -1.36
PCDH9-202ENST00000377865 MAP6D1Q9H9H5 199 aa6.53□□□□□ -1.36
PCDH9-202ENST00000377865 RS1O15537 224 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 TMEM258P61165 79 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 DEFB136Q30KP8 78 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 TET2Q6N021 2002 aaPredicted RBP6.52□□□□□ -1.37
PCDH9-202ENST00000377865 F8WEM9 126 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 CCL24O00175 119 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 APOC4P55056 127 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.37
PCDH9-202ENST00000377865 PDE6GP18545 87 aa6.51□□□□□ -1.37
PCDH9-202ENST00000377865 BRI3O95415 125 aa6.51□□□□□ -1.37
PCDH9-202ENST00000377865 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
PCDH9-202ENST00000377865 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms