RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 EREGO14944 169 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 NPYP01303 97 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 IGHV4-30-4P0DP06 118 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 DNLZQ5SXM8 178 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 SLC25A34Q6PIV7 304 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 FAM231BA6NCW3 169 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 CT83Q5H943 113 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 FAM231DQ6ZW35 169 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 TRAV26-1A0A087WT03 109 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 IGKV2-29A2NJV5 120 aaPredicted RBP6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 COLCA2A8K830 154 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 MTURNQ8N3F0 131 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 KLK5Q9Y337 293 aaPredicted RBP6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 ITPR1Q14643 2758 aa6.34□□□□□ -1.39
CRNKL1-202ENST00000377340 ZNF80P51504 273 aaPredicted RBP6.34□□□□□ -1.4
CRNKL1-202ENST00000377340 RPL39LQ96EH5 51 aaKnown RBP6.34□□□□□ -1.4
CRNKL1-202ENST00000377340 ICOSQ9Y6W8 199 aa6.34□□□□□ -1.4
CRNKL1-202ENST00000377340 DPM2O94777 84 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 XCL1P47992 114 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 DEFB131BA0A096LNP1 70 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 AMTNQ6UX39 209 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 TMEM263Q8WUH6 116 aaKnown RBP6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 APOMO95445 188 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 SFTA2Q6UW10 78 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 RNF152Q8N8N0 203 aa6.33□□□□□ -1.4
CRNKL1-202ENST00000377340 PYY3Q5JQD4 70 aa6.32□□□□□ -1.4
CRNKL1-202ENST00000377340 RETNQ9HD89 108 aa6.32□□□□□ -1.4
CRNKL1-202ENST00000377340 LOC400499M0QZD8 3231 aa6.32□□□□□ -1.4
CRNKL1-202ENST00000377340 A0A087X0K7 114 aa6.32□□□□□ -1.4
CRNKL1-202ENST00000377340 A6NDN8 102 aa6.32□□□□□ -1.4
CRNKL1-202ENST00000377340 A6NJY4 79 aa6.32□□□□□ -1.4
CRNKL1-202ENST00000377340 RPL13AP40429 203 aaKnown RBP6.32□□□□□ -1.4
CRNKL1-202ENST00000377340 TRAV2A0A0B4J234 112 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 TRBV7-9A0A0J9YWB2 115 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 PRIMA1Q86XR5 153 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 CHCHD1Q96BP2 118 aaKnown RBP6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 SMIM2Q9BVW6 85 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 MYO15AQ9UKN7 3530 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 IGHV1-24A0A0C4DH33 117 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 TEX48A0A1B0GUV7 120 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 G3V4G9 280 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 PFN2P35080 140 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 LYRM7Q5U5X0 104 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 C1orf43Q9BWL3 253 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 BRI3O95415 125 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 IGKCP01834 107 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 FRMD6-AS1P0C7T7 363 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 SEC11AP67812 179 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 ODF3L2Q3SX64 289 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 PRO0255Q9UI72 69 aa6.31□□□□□ -1.4
CRNKL1-202ENST00000377340 NXPH4O95158 308 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 KLK12Q9UKR0 248 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 ZC2HC1BQ5TFG8 222 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 SUMO4Q6EEV6 95 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 NSD1Q96L73 2696 aaPredicted RBP6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 COX6CP09669 75 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 P0DMU3 169 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 FAM231AP0DMU4 169 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 FAM231CP0DMU5 169 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 CRYBA4P53673 196 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 VSIG2Q96IQ7 327 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 SIGMAR1Q99720 223 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 C16orf95Q9H693 158 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 K7EQD1 137 aa6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 LINC00322Q6ZN03 302 aaPredicted RBP6.3□□□□□ -1.4
CRNKL1-202ENST00000377340 IGLV2-18A0A075B6J9 118 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 TRAV8-2A0A0B4J237 113 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 IGHV4-28A0A0C4DH34 117 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 LINC01559Q495D7 138 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 ZNF479Q96JC4 524 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 USP34Q70CQ2 3546 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 A4D1N5 150 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 IGLV1-51P01701 117 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 GTSF1Q8WW33 167 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 CHAC1Q9BUX1 264 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 LAMTOR2Q9Y2Q5 125 aa6.29□□□□□ -1.4
CRNKL1-202ENST00000377340 Q8N8P6 123 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 DCANP1Q8TF63 244 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 RASL10AQ92737 203 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 UQCR10Q9UDW1 63 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 TRBV7-3A0A075B6L6 115 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 SMIM13P0DJ93 91 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 RNF183Q96D59 192 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 RMI2Q96E14 147 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 LINC01549A6NIU2 74 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 M0R2N4 97 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 S100A7L2Q5SY68 101 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 LYPD6BQ8NI32 183 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms