RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
FXN-201ENST00000377270 H7C423 109 aa11.71□□□□□ -0.53
FXN-201ENST00000377270 LAGE3Q14657 143 aa11.71□□□□□ -0.53
FXN-201ENST00000377270 C5orf38Q86SI9 138 aa11.71□□□□□ -0.53
FXN-201ENST00000377270 NEXN-AS1Q8NBZ9 246 aa11.71□□□□□ -0.53
FXN-201ENST00000377270 EEF1AKMT3Q96AZ1 226 aa11.71□□□□□ -0.53
FXN-201ENST00000377270 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.53
FXN-201ENST00000377270 IGHV7-81A0A0B4J1V7 117 aa11.71□□□□□ -0.54
FXN-201ENST00000377270 ZNF575Q86XF7 245 aa11.71□□□□□ -0.54
FXN-201ENST00000377270 PRR25Q96S07 402 aa11.71□□□□□ -0.54
FXN-201ENST00000377270 A0A0J9YY99 117 aa11.7□□□□□ -0.54
FXN-201ENST00000377270 Q1RN00 199 aa11.7□□□□□ -0.54
FXN-201ENST00000377270 Q8N9W7 124 aa11.7□□□□□ -0.54
FXN-201ENST00000377270 SPTAN1Q13813 2472 aaKnown RBP11.7□□□□□ -0.54
FXN-201ENST00000377270 COX6B1P14854 86 aa11.7□□□□□ -0.54
FXN-201ENST00000377270 UBE2E1P51965 193 aa11.7□□□□□ -0.54
FXN-201ENST00000377270 Q6ZS46 218 aa11.7□□□□□ -0.54
FXN-201ENST00000377270 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
FXN-201ENST00000377270 EIF4EBP3O60516 100 aaPredicted RBP11.69□□□□□ -0.54
FXN-201ENST00000377270 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
FXN-201ENST00000377270 LMO4P61968 165 aa11.69□□□□□ -0.54
FXN-201ENST00000377270 PDE6HQ13956 83 aa11.69□□□□□ -0.54
FXN-201ENST00000377270 IGKV2-40A0A087WW87 121 aaPredicted RBP11.69□□□□□ -0.54
FXN-201ENST00000377270 IGKV2D-40P01614 121 aaPredicted RBP11.69□□□□□ -0.54
FXN-201ENST00000377270 CXCL5P42830 114 aa11.69□□□□□ -0.54
FXN-201ENST00000377270 HIST1H4AP62805 103 aaKnown RBP11.69□□□□□ -0.54
FXN-201ENST00000377270 C6orf226Q5I0X4 101 aa11.69□□□□□ -0.54
FXN-201ENST00000377270 H3BT86 120 aa11.68□□□□□ -0.54
FXN-201ENST00000377270 SAA4P35542 130 aa11.68□□□□□ -0.54
FXN-201ENST00000377270 ACYP1P07311 99 aa11.68□□□□□ -0.54
FXN-201ENST00000377270 PRIMA1Q86XR5 153 aa11.68□□□□□ -0.54
FXN-201ENST00000377270 CACNA1BQ00975 2339 aa11.67□□□□□ -0.54
FXN-201ENST00000377270 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
FXN-201ENST00000377270 SPRY2O43597 315 aa11.67□□□□□ -0.54
FXN-201ENST00000377270 CTSGP08311 255 aa11.67□□□□□ -0.54
FXN-201ENST00000377270 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
FXN-201ENST00000377270 ECSCRQ19T08 205 aa11.66□□□□□ -0.54
FXN-201ENST00000377270 Q8TAT8 98 aa11.66□□□□□ -0.54
FXN-201ENST00000377270 PSMG3-AS1Q96PY0 264 aa11.66□□□□□ -0.54
FXN-201ENST00000377270 PKD1L2Q7Z442 2459 aa11.65□□□□□ -0.54
FXN-201ENST00000377270 C16orf92Q96LL3 132 aa11.65□□□□□ -0.54
FXN-201ENST00000377270 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.54
FXN-201ENST00000377270 TRBV7-1A0A0A6YYK4 115 aa11.65□□□□□ -0.54
FXN-201ENST00000377270 SERP2Q8N6R1 65 aa11.65□□□□□ -0.54
FXN-201ENST00000377270 BRK1Q8WUW1 75 aa11.65□□□□□ -0.54
FXN-201ENST00000377270 TP53TG1Q9Y2A0 90 aa11.65□□□□□ -0.54
FXN-201ENST00000377270 LINC00482Q8N8I6 264 aa11.64□□□□□ -0.55
FXN-201ENST00000377270 NRACQ8N912 160 aa11.64□□□□□ -0.55
FXN-201ENST00000377270 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
FXN-201ENST00000377270 TRIAP1O43715 76 aa11.64□□□□□ -0.55
FXN-201ENST00000377270 C15orf32Q32M92 178 aa11.64□□□□□ -0.55
FXN-201ENST00000377270 RPL18AQ02543 176 aaKnown RBP11.63□□□□□ -0.55
FXN-201ENST00000377270 FAM110DQ8TAY7 271 aaPredicted RBP11.63□□□□□ -0.55
FXN-201ENST00000377270 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
FXN-201ENST00000377270 C16orf95Q9H693 158 aa11.63□□□□□ -0.55
FXN-201ENST00000377270 NPC2P61916 151 aa11.63□□□□□ -0.55
FXN-201ENST00000377270 PEMTQ9UBM1 199 aa11.63□□□□□ -0.55
FXN-201ENST00000377270 RHOHQ15669 191 aa11.62□□□□□ -0.55
FXN-201ENST00000377270 SLC25A29Q8N8R3 303 aa11.62□□□□□ -0.55
FXN-201ENST00000377270 RETNQ9HD89 108 aa11.62□□□□□ -0.55
FXN-201ENST00000377270 FAM19A1Q7Z5A9 133 aa11.62□□□□□ -0.55
FXN-201ENST00000377270 IGHV3OR16-10A0A075B7F0 116 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 G3V318 75 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 TRGV3P03979 118 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 SCGB3A1Q96QR1 104 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 SMAD5-AS1Q9Y6J3 95 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 PSMB8P28062 276 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 IGFL4Q6B9Z1 124 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 PIEZO1Q92508 2521 aa11.61□□□□□ -0.55
FXN-201ENST00000377270 A0A0B4J2C4 111 aa11.6□□□□□ -0.55
FXN-201ENST00000377270 C14orf178Q8N769 122 aaPredicted RBP11.6□□□□□ -0.55
FXN-201ENST00000377270 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
FXN-201ENST00000377270 SYNJ2BPP57105 145 aa11.6□□□□□ -0.55
FXN-201ENST00000377270 FHL2Q14192 279 aa11.6□□□□□ -0.55
FXN-201ENST00000377270 CFAP46Q8IYW2 2715 aa11.59□□□□□ -0.55
FXN-201ENST00000377270 TRAV12-2A0A075B6T6 113 aa11.59□□□□□ -0.55
FXN-201ENST00000377270 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
FXN-201ENST00000377270 KLK15Q9H2R5 256 aa11.59□□□□□ -0.55
FXN-201ENST00000377270 VPS13CQ709C8 3753 aa11.59□□□□□ -0.55
FXN-201ENST00000377270 COL12A1Q99715 3063 aa11.59□□□□□ -0.55
FXN-201ENST00000377270 TIRAPP58753 221 aa11.58□□□□□ -0.55
FXN-201ENST00000377270 CLEC19AQ6UXS0 136 aa11.58□□□□□ -0.55
FXN-201ENST00000377270 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
FXN-201ENST00000377270 ORMDL2Q53FV1 153 aa11.58□□□□□ -0.56
FXN-201ENST00000377270 C5orf56Q8N8D9 126 aa11.58□□□□□ -0.56
FXN-201ENST00000377270 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
FXN-201ENST00000377270 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
FXN-201ENST00000377270 C9orf139Q6ZV77 190 aa11.57□□□□□ -0.56
FXN-201ENST00000377270 CLEC2BQ92478 149 aa11.57□□□□□ -0.56
FXN-201ENST00000377270 ZFAND3Q9H8U3 227 aa11.57□□□□□ -0.56
FXN-201ENST00000377270 IGHV4-61A0A0C4DH41 118 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 IGHV3-66A0A0C4DH42 116 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 ERCC8Q13216 396 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 BRD3OSQ6XYD6 125 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 CCDC140Q96MF4 163 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 ZFHX3Q15911 3703 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 MAP1AP78559 2803 aaPredicted RBP11.56□□□□□ -0.56
FXN-201ENST00000377270 TMEM223A0PJW6 202 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 TMEM89A2RUT3 159 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms