RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 COTL1Q14019 142 aa12.02□□□□□ -0.49
TRIM27-202ENST00000377199 NIPBLQ6KC79 2804 aaeCLIP12.02□□□□□ -0.496e-6■■□□□ 13.6
TRIM27-202ENST00000377199 FOXI2Q6ZQN5 318 aa12.02□□□□□ -0.49
TRIM27-202ENST00000377199 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
TRIM27-202ENST00000377199 LINC01549A6NIU2 74 aa12.02□□□□□ -0.49
TRIM27-202ENST00000377199 GATA3P23771 443 aa12.02□□□□□ -0.49
TRIM27-202ENST00000377199 ETDBQ3ZM63 59 aa12.02□□□□□ -0.49
TRIM27-202ENST00000377199 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
TRIM27-202ENST00000377199 C11orf44Q8N8P7 122 aa12.02□□□□□ -0.49
TRIM27-202ENST00000377199 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
TRIM27-202ENST00000377199 M0QY20 66 aa12.01□□□□□ -0.49
TRIM27-202ENST00000377199 RBMY1A1P0DJD3 496 aaKnown RBP12.01□□□□□ -0.49
TRIM27-202ENST00000377199 RBMY1CP0DJD4 496 aa12.01□□□□□ -0.49
TRIM27-202ENST00000377199 HERVK_113P61574 105 aa12.01□□□□□ -0.49
TRIM27-202ENST00000377199 RBMY1FQ15415 496 aaKnown RBP12.01□□□□□ -0.49
TRIM27-202ENST00000377199 TAL2Q16559 108 aa12.01□□□□□ -0.49
TRIM27-202ENST00000377199 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
TRIM27-202ENST00000377199 RRN3P1Q2M238 152 aa12□□□□□ -0.49
TRIM27-202ENST00000377199 C2CD3Q4AC94 2353 aa12□□□□□ -0.49
TRIM27-202ENST00000377199 LGALS9O00182 355 aa12□□□□□ -0.49
TRIM27-202ENST00000377199 CEMP1Q6PRD7 247 aaPredicted RBP12□□□□□ -0.49
TRIM27-202ENST00000377199 Q9UF83 564 aa12□□□□□ -0.49
TRIM27-202ENST00000377199 COX6B1P14854 86 aa11.99□□□□□ -0.49
TRIM27-202ENST00000377199 ZNF702PQ9H963 129 aa11.99□□□□□ -0.49
TRIM27-202ENST00000377199 TRBV27A0A0K0K1C4 114 aa11.99□□□□□ -0.49
TRIM27-202ENST00000377199 POM121L12Q8N7R1 296 aa11.99□□□□□ -0.49
TRIM27-202ENST00000377199 DSCR9P59020 149 aa11.98□□□□□ -0.49
TRIM27-202ENST00000377199 SAMD13Q5VXD3 122 aa11.98□□□□□ -0.49
TRIM27-202ENST00000377199 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
TRIM27-202ENST00000377199 NBPF19A0A087WUL8 3843 aa11.98□□□□□ -0.49
TRIM27-202ENST00000377199 JMJD1CQ15652 2540 aa11.97□□□□□ -0.49
TRIM27-202ENST00000377199 ADARB2-AS1A8MUL3 147 aa11.97□□□□□ -0.49
TRIM27-202ENST00000377199 GAGE13Q4V321 117 aa11.97□□□□□ -0.49
TRIM27-202ENST00000377199 TRPT1Q86TN4 253 aaKnown RBP11.97□□□□□ -0.49
TRIM27-202ENST00000377199 A0A0J9YXV3 536 aa11.96□□□□□ -0.49
TRIM27-202ENST00000377199 H7C2G1 150 aa11.96□□□□□ -0.49
TRIM27-202ENST00000377199 LGALS3P17931 250 aaKnown RBP11.96□□□□□ -0.49
TRIM27-202ENST00000377199 PSMB2P49721 201 aa11.96□□□□□ -0.49
TRIM27-202ENST00000377199 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
TRIM27-202ENST00000377199 IGHV3OR16-12A0A075B7B8 117 aa11.96□□□□□ -0.5
TRIM27-202ENST00000377199 A0A0J9YY99 117 aa11.96□□□□□ -0.5
TRIM27-202ENST00000377199 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.5
TRIM27-202ENST00000377199 BBC3Q96PG8 261 aaPredicted RBP11.96□□□□□ -0.5
TRIM27-202ENST00000377199 TIMM17AQ99595 171 aa11.96□□□□□ -0.5
TRIM27-202ENST00000377199 AKAP9Q99996 3911 aa11.96□□□□□ -0.5
TRIM27-202ENST00000377199 A0A096LNT2 108 aa11.95□□□□□ -0.5
TRIM27-202ENST00000377199 TMEM61Q8N0U2 210 aa11.95□□□□□ -0.5
TRIM27-202ENST00000377199 UBE2E2Q96LR5 201 aa11.95□□□□□ -0.5
TRIM27-202ENST00000377199 TMEM238LA0A1B0GVL6 79 aa11.95□□□□□ -0.5
TRIM27-202ENST00000377199 A6NJY4 79 aa11.95□□□□□ -0.5
TRIM27-202ENST00000377199 J3QQQ9 107 aa11.95□□□□□ -0.5
TRIM27-202ENST00000377199 INSL3P51460 131 aa11.95□□□□□ -0.5
TRIM27-202ENST00000377199 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 ELANEP08246 267 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 IGHV4-31P0DP07 118 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 Q6YL49 198 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 IGHV3-38A0A0C4DH36 116 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 A0A1B0GWB2 263 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 I3L3M4 83 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 SPAG8Q99932 426 aaPredicted RBP11.94□□□□□ -0.5
TRIM27-202ENST00000377199 SPXQ9BT56 116 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 VCX2Q9H322 139 aa11.94□□□□□ -0.5
TRIM27-202ENST00000377199 TSPAN13O95857 204 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 Q5PR19 223 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 MTORP42345 2549 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 APCP25054 2843 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 ACANP16112 2415 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 TRAV2A0A0B4J234 112 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 RBMY1BA6NDE4 496 aaKnown RBP11.93□□□□□ -0.5
TRIM27-202ENST00000377199 RBMY1EA6NEQ0 496 aaKnown RBP11.93□□□□□ -0.5
TRIM27-202ENST00000377199 F8W1H4 67 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 RBMY1DP0C7P1 496 aaKnown RBP11.93□□□□□ -0.5
TRIM27-202ENST00000377199 C20orf203Q8NBC4 194 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 DYNLRB2Q8TF09 96 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 ODF3Q96PU9 254 aa11.93□□□□□ -0.5
TRIM27-202ENST00000377199 TRBV6-5A0A0K0K1A5 114 aa11.92□□□□□ -0.5
TRIM27-202ENST00000377199 CD28P10747 220 aa11.92□□□□□ -0.5
TRIM27-202ENST00000377199 RPL32P62910 135 aaKnown RBP11.92□□□□□ -0.5
TRIM27-202ENST00000377199 SPANXB1Q9NS25 103 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-202ENST00000377199 RAX2Q96IS3 184 aa11.92□□□□□ -0.5
TRIM27-202ENST00000377199 Q96MF0 132 aa11.92□□□□□ -0.5
TRIM27-202ENST00000377199 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-202ENST00000377199 J3QLI3 93 aa11.91□□□□□ -0.5
TRIM27-202ENST00000377199 LINC01587Q99440 93 aa11.91□□□□□ -0.5
TRIM27-202ENST00000377199 DLX4Q92988 240 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-202ENST00000377199 TNFRSF18Q9Y5U5 241 aa11.91□□□□□ -0.5
TRIM27-202ENST00000377199 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
TRIM27-202ENST00000377199 Q6ZSN1 163 aa11.91□□□□□ -0.5
TRIM27-202ENST00000377199 FLNAP21333 2647 aaKnown RBP11.9□□□□□ -0.5
TRIM27-202ENST00000377199 IGLV4-3A0A075B6K6 122 aa11.9□□□□□ -0.5
TRIM27-202ENST00000377199 H3BMM0 161 aa11.9□□□□□ -0.5
TRIM27-202ENST00000377199 PTH2Q96A98 100 aa11.9□□□□□ -0.5
TRIM27-202ENST00000377199 UBR5O95071 2799 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-202ENST00000377199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-202ENST00000377199 IGKV2-29A2NJV5 120 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-202ENST00000377199 SCGB1C2P0DMR2 95 aa11.9□□□□□ -0.5
TRIM27-202ENST00000377199 NSUN5P1Q3KNT7 163 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 230.2 ms