RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 OR10AG1Q8NH19 301 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 SSBP4Q9BWG4 385 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-204ENST00000376643 MYCBP2O75592 4640 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
HDAC6-204ENST00000376643 SMLR1H3BR10 107 aa9.65□□□□□ -0.86
HDAC6-204ENST00000376643 TEX46H3BTG2 121 aa9.65□□□□□ -0.86
HDAC6-204ENST00000376643 H2AFB1P0C5Y9 115 aa9.65□□□□□ -0.86
HDAC6-204ENST00000376643 MANBALQ9NQG1 85 aa9.65□□□□□ -0.86
HDAC6-204ENST00000376643 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
HDAC6-204ENST00000376643 XKRY2A2RUG3 117 aa9.64□□□□□ -0.87
HDAC6-204ENST00000376643 HMSDA8MTL9 139 aa9.64□□□□□ -0.87
HDAC6-204ENST00000376643 RPS20P60866 119 aaKnown RBP9.64□□□□□ -0.87
HDAC6-204ENST00000376643 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
HDAC6-204ENST00000376643 DGAT2L7PQ6IED9 249 aa9.64□□□□□ -0.87
HDAC6-204ENST00000376643 DAZAP1Q96EP5 407 aaKnown RBP9.64□□□□□ -0.87
HDAC6-204ENST00000376643 DNAJC30Q96LL9 226 aa9.64□□□□□ -0.87
HDAC6-204ENST00000376643 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
HDAC6-204ENST00000376643 HLA-DQA1P01909 254 aa9.63□□□□□ -0.87
HDAC6-204ENST00000376643 EIF5AL1Q6IS14 154 aaKnown RBP9.63□□□□□ -0.87
HDAC6-204ENST00000376643 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
HDAC6-204ENST00000376643 TMUB2Q71RG4 321 aa9.63□□□□□ -0.87
HDAC6-204ENST00000376643 SMIM12Q96EX1 92 aa9.63□□□□□ -0.87
HDAC6-204ENST00000376643 BCL2L11O43521 198 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 OXTP01178 125 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 RAB5CP51148 216 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 CACNG7P62955 275 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 RPL19P84098 196 aaKnown RBP9.62□□□□□ -0.87
HDAC6-204ENST00000376643 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 CLRN3Q8NCR9 226 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 CIRBP-AS1Q8TBR5 109 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 DERL1Q9BUN8 251 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
HDAC6-204ENST00000376643 hCG_2014768A0A024R1R8 64 aa9.61□□□□□ -0.87
HDAC6-204ENST00000376643 IGHV1-24A0A0C4DH33 117 aa9.61□□□□□ -0.87
HDAC6-204ENST00000376643 A0A1B0GV50 99 aa9.61□□□□□ -0.87
HDAC6-204ENST00000376643 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
HDAC6-204ENST00000376643 RPL35P42766 123 aaKnown RBP9.61□□□□□ -0.87
HDAC6-204ENST00000376643 PRR34Q9NV39 138 aa9.61□□□□□ -0.87
HDAC6-204ENST00000376643 F2Z2F3 143 aa9.6□□□□□ -0.87
HDAC6-204ENST00000376643 IQCJQ1A5X6 159 aa9.6□□□□□ -0.87
HDAC6-204ENST00000376643 C11orf52Q96A22 123 aa9.6□□□□□ -0.87
HDAC6-204ENST00000376643 TRAV8-4A0A0B4J246 113 aa9.59□□□□□ -0.87
HDAC6-204ENST00000376643 P01737 135 aa9.59□□□□□ -0.87
HDAC6-204ENST00000376643 TRGC1P0CF51 173 aa9.59□□□□□ -0.87
HDAC6-204ENST00000376643 RBX1P62877 108 aa9.59□□□□□ -0.87
HDAC6-204ENST00000376643 FER1L6-AS1Q8NA97 138 aa9.59□□□□□ -0.87
HDAC6-204ENST00000376643 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
HDAC6-204ENST00000376643 PDE6DO43924 150 aa9.58□□□□□ -0.88
HDAC6-204ENST00000376643 IFNA1P01562 189 aa9.58□□□□□ -0.88
HDAC6-204ENST00000376643 MGPP08493 103 aa9.58□□□□□ -0.88
HDAC6-204ENST00000376643 GZMBP10144 247 aa9.58□□□□□ -0.88
HDAC6-204ENST00000376643 TPPP3Q9BW30 176 aa9.58□□□□□ -0.88
HDAC6-204ENST00000376643 GNG13Q9P2W3 67 aa9.58□□□□□ -0.88
HDAC6-204ENST00000376643 MUC21A0A0G2JKD1 596 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 MUC21A0A140T8X8 626 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 GNG4P50150 75 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 SSTP61278 116 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 RPL37AP61513 92 aaKnown RBP9.57□□□□□ -0.88
HDAC6-204ENST00000376643 GAGE6Q13070 117 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 LINC00269Q8N2A0 174 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 C9orf163Q8N9P6 203 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 OR2D3Q8NGH3 330 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 DNAH8Q96JB1 4490 aa9.57□□□□□ -0.88
HDAC6-204ENST00000376643 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-204ENST00000376643 A0A1B0GUV1 79 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 M0QY20 66 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 UBE2L6O14933 153 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 CCL20P78556 96 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 REG3AQ06141 175 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 WDR73Q6P4I2 378 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 TMEM243Q9BU79 118 aa9.56□□□□□ -0.88
HDAC6-204ENST00000376643 PRSS1P07477 247 aa9.55□□□□□ -0.88
HDAC6-204ENST00000376643 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
HDAC6-204ENST00000376643 TAGLN2P37802 199 aaKnown RBP9.55□□□□□ -0.88
HDAC6-204ENST00000376643 RASL11AQ6T310 242 aa9.55□□□□□ -0.88
HDAC6-204ENST00000376643 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
HDAC6-204ENST00000376643 CNBPP62633 177 aaKnown RBP9.54□□□□□ -0.88
HDAC6-204ENST00000376643 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-204ENST00000376643 SUMO4Q6EEV6 95 aa9.54□□□□□ -0.88
HDAC6-204ENST00000376643 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
HDAC6-204ENST00000376643 C19orf71A6NCJ1 209 aa9.53□□□□□ -0.88
HDAC6-204ENST00000376643 COTL1Q14019 142 aa9.53□□□□□ -0.88
HDAC6-204ENST00000376643 NIT2Q9NQR4 276 aa9.53□□□□□ -0.88
HDAC6-204ENST00000376643 hDV102S1A0JD36 115 aa9.52□□□□□ -0.89
HDAC6-204ENST00000376643 NKX2-5P52952 324 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-204ENST00000376643 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-204ENST00000376643 CFAP161Q6P656 301 aa9.52□□□□□ -0.89
HDAC6-204ENST00000376643 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
HDAC6-204ENST00000376643 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
HDAC6-204ENST00000376643 AMTP48728 403 aa9.51□□□□□ -0.89
HDAC6-204ENST00000376643 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
HDAC6-204ENST00000376643 MED9Q9NWA0 146 aa9.51□□□□□ -0.89
HDAC6-204ENST00000376643 SULT1A2P50226 295 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms