RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 TMEM170BQ5T4T1 132 aa9.18□□□□□ -0.94
TNFSF13B-201ENST00000375887 AMELXQ99217 191 aa9.18□□□□□ -0.94
TNFSF13B-201ENST00000375887 ANKRD17O75179 2603 aaKnown RBP9.18□□□□□ -0.94
TNFSF13B-201ENST00000375887 P0DMU3 169 aa9.18□□□□□ -0.94
TNFSF13B-201ENST00000375887 FAM231AP0DMU4 169 aa9.18□□□□□ -0.94
TNFSF13B-201ENST00000375887 FAM231CP0DMU5 169 aa9.18□□□□□ -0.94
TNFSF13B-201ENST00000375887 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
TNFSF13B-201ENST00000375887 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 NIPBLQ6KC79 2804 aaeCLIP9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 TRBV6-5A0A0K0K1A5 114 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 TSPAN13O95857 204 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 C1QTNF4Q9BXJ3 329 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 ZNF580Q9UK33 172 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 ABCA12Q86UK0 2595 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 IGHV3-73A0A0B4J1V6 119 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 K7EQG2 157 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 SYNJ2BPP57105 145 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 ZNF56Q15929 161 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 ATP6V0E2Q8NHE4 81 aa9.17□□□□□ -0.94
TNFSF13B-201ENST00000375887 PTPN13Q12923 2485 aa9.16□□□□□ -0.94
TNFSF13B-201ENST00000375887 B4DSR2 109 aa9.16□□□□□ -0.94
TNFSF13B-201ENST00000375887 TGFAP01135 160 aa9.16□□□□□ -0.94
TNFSF13B-201ENST00000375887 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
TNFSF13B-201ENST00000375887 IGHV3-30P01768 117 aa9.15□□□□□ -0.94
TNFSF13B-201ENST00000375887 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.94
TNFSF13B-201ENST00000375887 PAPPA-AS1Q5QFB9 102 aa9.15□□□□□ -0.94
TNFSF13B-201ENST00000375887 NDUFA11Q86Y39 141 aa9.15□□□□□ -0.94
TNFSF13B-201ENST00000375887 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 LOC107984156A0A0G2JMH3 177 aa9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 CFC1BP0CG36 223 aa9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 CFC1P0CG37 223 aa9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 HERVK_113P61574 105 aa9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 ARL17AQ8IVW1 177 aa9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 SLC25A29Q8N8R3 303 aa9.15□□□□□ -0.95
TNFSF13B-201ENST00000375887 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 NF1P21359 2839 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 ZNF469Q96JG9 3925 aaPredicted RBP9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 A6NJY4 79 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 MT-ATP8P03928 68 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 CFAP126Q5VTH2 177 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 C18orf65Q6ZTR6 163 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 DUX3Q96PT4 197 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 ODF3Q96PU9 254 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 AKAP9Q99996 3911 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 J3QQQ9 107 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 RBMY1A1P0DJD3 496 aaKnown RBP9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 RBMY1CP0DJD4 496 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 PSMB2P49721 201 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 PROK1P58294 105 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 UBE2D3P61077 147 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 UBE2D2P62837 147 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 RBMY1FQ15415 496 aaKnown RBP9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 Q6ZUT4 128 aa9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
TNFSF13B-201ENST00000375887 Q9UF83 564 aa9.13□□□□□ -0.95
TNFSF13B-201ENST00000375887 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
TNFSF13B-201ENST00000375887 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
TNFSF13B-201ENST00000375887 NFE4Q86UQ8 179 aa9.13□□□□□ -0.95
TNFSF13B-201ENST00000375887 PTH2Q96A98 100 aa9.13□□□□□ -0.95
TNFSF13B-201ENST00000375887 PRB1P04280 392 aa9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 NSUN5P1Q3KNT7 163 aa9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 C20orf203Q8NBC4 194 aa9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 CHD6Q8TD26 2715 aa9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 KNCNA6PVL3 124 aa9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 XGP55808 180 aa9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
TNFSF13B-201ENST00000375887 A0A0J9YXV3 536 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 HOXD3P31249 432 aaPredicted RBP9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 TRPT1Q86TN4 253 aaKnown RBP9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 RNF183Q96D59 192 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 VCX2Q9H322 139 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 ZNF462Q96JM2 2506 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 TCL1BO95988 128 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 RHOHQ15669 191 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 ANAPC13Q9BS18 74 aa9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 BEX4Q9NWD9 120 aaPredicted RBP9.11□□□□□ -0.95
TNFSF13B-201ENST00000375887 IGLV4-3A0A075B6K6 122 aa9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 SETD2Q9BYW2 2564 aaPredicted RBP9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 I3L3M4 83 aa9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 FHL3Q13643 280 aa9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 EPG5Q9HCE0 2579 aa9.1□□□□□ -0.95
TNFSF13B-201ENST00000375887 NACAE9PAV3 2078 aa9.09□□□□□ -0.95
TNFSF13B-201ENST00000375887 A0A096LNT2 108 aa9.09□□□□□ -0.95
TNFSF13B-201ENST00000375887 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
TNFSF13B-201ENST00000375887 PPDPFLQ8WWR9 84 aa9.09□□□□□ -0.95
TNFSF13B-201ENST00000375887 NOTCH3Q9UM47 2321 aa9.09□□□□□ -0.95
TNFSF13B-201ENST00000375887 RHODO00212 210 aa9.09□□□□□ -0.95
TNFSF13B-201ENST00000375887 C10orf126Q8N4M7 172 aa9.09□□□□□ -0.95
TNFSF13B-201ENST00000375887 SS18L2Q9UHA2 77 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms