RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
CLCNKA-202ENST00000375692 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
CLCNKA-202ENST00000375692 SLC25A29Q8N8R3 303 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 AMELXQ99217 191 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 NOTCH2Q04721 2471 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 TEX15Q9BXT5 2789 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 XGP55808 180 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 BLCAPP62952 87 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 SORL1Q92673 2214 aa10.52□□□□□ -0.73
CLCNKA-202ENST00000375692 IGHV3-64A0A075B6Q5 118 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 IGKV3-20P01619 116 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 SCGB1C2P0DMR2 95 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 PDZD2O15018 2839 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 KLLNB2CW77 178 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 J3QQQ9 107 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 CLUHP3Q96NS8 147 aa10.51□□□□□ -0.73
CLCNKA-202ENST00000375692 CREBBPQ92793 2442 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 TCTEX1D4Q5JR98 221 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 Q5PR19 223 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 TEN1Q86WV5 123 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 C10orf126Q8N4M7 172 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 TRAV12-2A0A075B6T6 113 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 IGHV1-69P01742 117 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 CRIP2P52943 208 aaPredicted RBP10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 DEFB113Q30KQ7 82 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 PPDPFLQ8WWR9 84 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 TIMM17AQ99595 171 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 MDFICQ9P1T7 246 aa10.5□□□□□ -0.73
CLCNKA-202ENST00000375692 H7C2G1 150 aa10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 IGHV4-38-2P0DP08 117 aa10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 CRYBA4P53673 196 aa10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 RPL32P62910 135 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 Q6ZUT4 128 aa10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 PRO1854Q9UHT4 67 aa10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 LGALS3P17931 250 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 GEMIN7Q9H840 131 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-202ENST00000375692 A0A096LNT2 108 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 TRBV27A0A0K0K1C4 114 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 A4D1N5 150 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 A8MWV9 139 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 AVPP01185 164 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 ITPR3Q14573 2671 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 H3BUX3 64 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 LYRM7Q5U5X0 104 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 TRPT1Q86TN4 253 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 ANKRD29Q8N6D5 301 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 USMG5Q96IX5 58 aa10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 DAZ1Q9NQZ3 744 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-202ENST00000375692 TRBV7-9A0A0J9YWB2 115 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 MSMBP08118 114 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 ZNF56Q15929 161 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 ZNF580Q9UK33 172 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 TRBV20-1A0A075B6N2 111 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 TRAV2A0A0B4J234 112 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 IGHG2P01859 326 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 ACANP16112 2415 aa10.47□□□□□ -0.73
CLCNKA-202ENST00000375692 LGALS9O00182 355 aa10.46□□□□□ -0.73
CLCNKA-202ENST00000375692 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
CLCNKA-202ENST00000375692 P0DMU3 169 aa10.46□□□□□ -0.73
CLCNKA-202ENST00000375692 FAM231AP0DMU4 169 aa10.46□□□□□ -0.73
CLCNKA-202ENST00000375692 FAM231CP0DMU5 169 aa10.46□□□□□ -0.73
CLCNKA-202ENST00000375692 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.73
CLCNKA-202ENST00000375692 DCANP1Q8TF63 244 aa10.46□□□□□ -0.73
CLCNKA-202ENST00000375692 M0QY20 66 aa10.46□□□□□ -0.74
CLCNKA-202ENST00000375692 DSCR9P59020 149 aa10.46□□□□□ -0.74
CLCNKA-202ENST00000375692 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 KRTAP1-3Q8IUG1 177 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 MUSTN1Q8IVN3 82 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 C9JAW5 83 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 TMEM95Q3KNT9 176 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 Q8N1Y9 231 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 Q96MF0 132 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 MXRA5Q9NR99 2828 aa10.45□□□□□ -0.74
CLCNKA-202ENST00000375692 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 SONP18583 2426 aaKnown RBP10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 TRBV6-5A0A0K0K1A5 114 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 B4DSR2 109 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 IGHV3-33P01772 117 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 ELANEP08246 267 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 ID1P41134 155 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 WFDC11Q8NEX6 87 aa10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 BEX4Q9NWD9 120 aaPredicted RBP10.44□□□□□ -0.74
CLCNKA-202ENST00000375692 LEPROTO15243 131 aa10.43□□□□□ -0.74
CLCNKA-202ENST00000375692 SLC25A20O43772 301 aa10.43□□□□□ -0.74
CLCNKA-202ENST00000375692 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
CLCNKA-202ENST00000375692 C9orf85Q96MD7 179 aa10.43□□□□□ -0.74
CLCNKA-202ENST00000375692 A6NDX4 124 aa10.43□□□□□ -0.74
CLCNKA-202ENST00000375692 ZNF22P17026 224 aaPredicted RBP10.43□□□□□ -0.74
CLCNKA-202ENST00000375692 IGLV1-40P01703 118 aa10.42□□□□□ -0.74
CLCNKA-202ENST00000375692 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms