RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CARHSP1Q9Y2V2 147 aaKnown RBP8.3□□□□□ -1.08
LSM2-208ENST00000375661 K7EQD1 137 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 GYPEP15421 78 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 EVI2AP22794 236 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 XGP55808 180 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 TWIST1Q15672 202 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 Q9UF83 564 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 NAT8BQ9UHF3 227 aa8.29□□□□□ -1.08
LSM2-208ENST00000375661 A0A1B0GUT8 65 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 MT-ND4LP03901 98 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 RHOHQ15669 191 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 Q5VSD8 79 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 SLC7A5P1Q8MH63 180 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 ICOSQ9Y6W8 199 aa8.28□□□□□ -1.08
LSM2-208ENST00000375661 SIVA1O15304 175 aa8.27□□□□□ -1.09
LSM2-208ENST00000375661 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
LSM2-208ENST00000375661 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
LSM2-208ENST00000375661 RAB4BP61018 213 aa8.27□□□□□ -1.09
LSM2-208ENST00000375661 MRPL23Q16540 153 aaKnown RBP8.27□□□□□ -1.09
LSM2-208ENST00000375661 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
LSM2-208ENST00000375661 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
LSM2-208ENST00000375661 LINC00694P0DN24 101 aa8.26□□□□□ -1.09
LSM2-208ENST00000375661 ZNF56Q15929 161 aa8.26□□□□□ -1.09
LSM2-208ENST00000375661 BORCS7Q96B45 105 aa8.26□□□□□ -1.09
LSM2-208ENST00000375661 DPH3P1Q9H4G8 78 aa8.26□□□□□ -1.09
LSM2-208ENST00000375661 GAGE12JA6NER3 117 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 F5H697 171 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 MGPP08493 103 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 SRIP30626 198 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 GAGE1Q13065 139 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 GAGE4Q13068 117 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 GAGE5Q13069 117 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 RIGQ13278 110 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 GAGE13Q4V321 117 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 NEGR1Q7Z3B1 354 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 CLRN3Q8NCR9 226 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 CTDSP1Q9GZU7 261 aa8.25□□□□□ -1.09
LSM2-208ENST00000375661 TRBV10-1A0A0K0K1A3 114 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 C7orf77A4D0Y5 90 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 K7EP13 123 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 M0QY20 66 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 APOC3P02656 99 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 SUMO4Q6EEV6 95 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 LYPD5Q6UWN5 251 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 TMEM191AQ9H0A3 160 aa8.24□□□□□ -1.09
LSM2-208ENST00000375661 A0A087WTM6 91 aa8.23□□□□□ -1.09
LSM2-208ENST00000375661 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
LSM2-208ENST00000375661 MRPL54Q6P161 138 aaKnown RBP8.23□□□□□ -1.09
LSM2-208ENST00000375661 SMIM15Q7Z3B0 74 aa8.23□□□□□ -1.09
LSM2-208ENST00000375661 NEXN-AS1Q8NBZ9 246 aa8.23□□□□□ -1.09
LSM2-208ENST00000375661 RNF185Q96GF1 192 aa8.23□□□□□ -1.09
LSM2-208ENST00000375661 VPS13BQ7Z7G8 4022 aa8.22□□□□□ -1.09
LSM2-208ENST00000375661 TRAV9-2A0A087WT02 112 aa8.22□□□□□ -1.09
LSM2-208ENST00000375661 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
LSM2-208ENST00000375661 KRTAP10-1P60331 282 aa8.22□□□□□ -1.09
LSM2-208ENST00000375661 NDUFA5Q16718 116 aa8.22□□□□□ -1.09
LSM2-208ENST00000375661 IMMP2LQ96T52 175 aa8.22□□□□□ -1.09
LSM2-208ENST00000375661 TMEM242Q9NWH2 141 aa8.22□□□□□ -1.09
LSM2-208ENST00000375661 TRBV7-3A0A075B6L6 115 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 A0A087WWC5 75 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 TRAV26-2A0A0B4J265 109 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 A0A1B0GW15 77 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 GAS8-AS1O95177 125 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 RAB4AP20338 218 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.1
LSM2-208ENST00000375661 CAMPP49913 170 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 UBE2D3P61077 147 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 UBE2D2P62837 147 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 RPL36AP83881 106 aaKnown RBP8.21□□□□□ -1.1
LSM2-208ENST00000375661 RHEBQ15382 184 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 SH2D6Q7Z4S9 175 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 SVBPQ8N300 66 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 GATD1Q8NB37 220 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 ATP6V0E2Q8NHE4 81 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 RPL36ALQ969Q0 106 aaKnown RBP8.21□□□□□ -1.1
LSM2-208ENST00000375661 RPS10P5Q9NQ39 176 aa8.21□□□□□ -1.1
LSM2-208ENST00000375661 H7C1H1 209 aa8.2□□□□□ -1.1
LSM2-208ENST00000375661 GCSHP23434 173 aa8.2□□□□□ -1.1
LSM2-208ENST00000375661 TIRAPP58753 221 aa8.2□□□□□ -1.1
LSM2-208ENST00000375661 FAM104BQ5XKR9 115 aa8.2□□□□□ -1.1
LSM2-208ENST00000375661 RASL11AQ6T310 242 aa8.2□□□□□ -1.1
LSM2-208ENST00000375661 ATP5L2Q7Z4Y8 100 aa8.2□□□□□ -1.1
LSM2-208ENST00000375661 GTSF1LQ9H1H1 148 aa8.2□□□□□ -1.1
LSM2-208ENST00000375661 SNAPINO95295 136 aa8.19□□□□□ -1.1
LSM2-208ENST00000375661 DNAH10OSP0CZ25 163 aa8.19□□□□□ -1.1
LSM2-208ENST00000375661 HBBP68871 147 aa8.19□□□□□ -1.1
LSM2-208ENST00000375661 ATRAIDQ6UW56 229 aa8.19□□□□□ -1.1
LSM2-208ENST00000375661 BTF3L4Q96K17 158 aa8.19□□□□□ -1.1
LSM2-208ENST00000375661 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
LSM2-208ENST00000375661 NIT2Q9NQR4 276 aa8.19□□□□□ -1.1
LSM2-208ENST00000375661 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
LSM2-208ENST00000375661 IGHV3-38A0A0C4DH36 116 aa8.18□□□□□ -1.1
LSM2-208ENST00000375661 S100A8P05109 93 aa8.18□□□□□ -1.1
LSM2-208ENST00000375661 MRPL51Q4U2R6 128 aaKnown RBP8.18□□□□□ -1.1
LSM2-208ENST00000375661 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
LSM2-208ENST00000375661 RPL39LQ96EH5 51 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms