RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 E9PLD3 99 aa4.97□□□□□ -1.61
SMC1A-202ENST00000375340 SS18Q15532 418 aa4.97□□□□□ -1.61
SMC1A-202ENST00000375340 PRB1P04280 392 aa4.97□□□□□ -1.61
SMC1A-202ENST00000375340 SPANXB1Q9NS25 103 aaPredicted RBP4.97□□□□□ -1.61
SMC1A-202ENST00000375340 HERVK_113P63121 156 aa4.97□□□□□ -1.61
SMC1A-202ENST00000375340 NDUFA11Q86Y39 141 aa4.97□□□□□ -1.61
SMC1A-202ENST00000375340 C3orf56Q8N813 242 aa4.97□□□□□ -1.61
SMC1A-202ENST00000375340 NEXN-AS1Q8NBZ9 246 aa4.97□□□□□ -1.61
SMC1A-202ENST00000375340 B5MCH6 92 aa4.96□□□□□ -1.61
SMC1A-202ENST00000375340 RHODO00212 210 aa4.96□□□□□ -1.61
SMC1A-202ENST00000375340 XCL1P47992 114 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 PRSS47A8MTI9 375 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 MT-ATP8P03928 68 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 SPAG8Q99932 426 aaPredicted RBP4.96□□□□□ -1.62
SMC1A-202ENST00000375340 VPREB3Q9UKI3 123 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 NBL1P41271 181 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 PTPRBP23467 1997 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 CCDC168Q8NDH2 2452 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 CRYBA4P53673 196 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 OVOL2Q9BRP0 275 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 K7EQD1 137 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 C11orf21Q9P2W6 132 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 C19orf84I3L1E1 186 aa4.96□□□□□ -1.62
SMC1A-202ENST00000375340 SONP18583 2426 aaKnown RBP4.95□□□□□ -1.62
SMC1A-202ENST00000375340 ZFAND3Q9H8U3 227 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 LENEPQ9Y5L5 61 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 ARHGAP32A7KAX9 2087 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 BRCA2P51587 3418 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 BAALC-AS2P0C853 105 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 GATA3P23771 443 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 DPH3Q96FX2 82 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 A0A0J9YY99 117 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 IGHG4P01861 327 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 COL27A1Q8IZC6 1860 aaPredicted RBP4.95□□□□□ -1.62
SMC1A-202ENST00000375340 CHD8Q9HCK8 2581 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 EDN2P20800 178 aa4.95□□□□□ -1.62
SMC1A-202ENST00000375340 NOTCH2Q04721 2471 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 C10orf99Q6UWK7 81 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 HIVEP2P31629 2446 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 TEN1Q86WV5 123 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 NRACQ8N912 160 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 PROK1P58294 105 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 Q6ZUT4 128 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 C10orf105Q8TEF2 133 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 TEX49A0A1B0GTD5 131 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 HIVEP3Q5T1R4 2406 aa4.94□□□□□ -1.62
SMC1A-202ENST00000375340 F5H768 121 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 LGALS9O00182 355 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 CDSNQ15517 529 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 CRLF1O75462 422 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 LINC01620Q4KN68 170 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 TRAV13-2A0A0B4J235 113 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 SOCS3O14543 225 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 NCR3O14931 201 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 PRO3102Q9H379 93 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 SPANXA1Q9NS26 97 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 FSTL3O95633 263 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 SLC25A29Q8N8R3 303 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 IGHV4-4A0A075B6R2 117 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 PRM2P04554 102 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 CLPSL1A2RUU4 121 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 A6NDX4 124 aa4.93□□□□□ -1.62
SMC1A-202ENST00000375340 J3QLI3 93 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 MED14OSP0DP75 135 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 A8MZ25 164 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 ELANEP08246 267 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 C5orf38Q86SI9 138 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 RNF183Q96D59 192 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 TIMM17AQ99595 171 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 USP9YO00507 2555 aaPredicted RBP4.92□□□□□ -1.62
SMC1A-202ENST00000375340 IGLV10-54A0A075B6I4 117 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 IGKV3D-7A0A0C4DH55 119 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 IGHV3-30-3P0DP02 117 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 ATP6V0E2Q8NHE4 81 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 A0A0J9YXY3 114 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 CCL24O00175 119 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 CMC4P56277 68 aaPredicted RBP4.92□□□□□ -1.62
SMC1A-202ENST00000375340 PIFOQ8TCI5 191 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 Q9HAA7 133 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 DSCAML1Q8TD84 2053 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 TRAV26-1A0A087WT03 109 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 DAD1P61803 113 aa4.92□□□□□ -1.62
SMC1A-202ENST00000375340 INAFM2P0DMQ5 153 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 INSL3P51460 131 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 LINC00467Q9BRT7 94 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 TM2D2Q9BX73 214 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 A0A0J9YX75 114 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 ESM1Q9NQ30 184 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 ORMDL1Q9P0S3 153 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 USP9XQ93008 2570 aaPredicted RBP4.91□□□□□ -1.62
SMC1A-202ENST00000375340 IGHG2P01859 326 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 MRPS12O15235 138 aaKnown RBP4.91□□□□□ -1.62
SMC1A-202ENST00000375340 C11orf71Q6IPW1 123 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 FAM236AA0A1B0GUQ0 79 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 FAM236BA0A1B0GV22 79 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 TRACP01848 142 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 DEFB4AO15263 64 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 Q6ZS46 218 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms