RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 KLLNB2CW77 178 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 H3BVH4 76 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 K7EMI3 77 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 M0R381 172 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 NXPH4O95158 308 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 IGHV4-59P01825 116 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 FGF6P10767 208 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 G0S2P27469 103 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 ID1P41134 155 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 ASIPP42127 132 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 TFPI2P48307 235 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 HINT1P49773 126 aaPredicted RBP3.53□□□□□ -1.84
USP48-202ENST00000374730 DEFB112Q30KQ8 113 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 BVES-AS1Q5T3Y7 98 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 SPANXN1Q5VSR9 72 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 C12orf54Q6X4T0 127 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 C2orf91Q6ZV80 131 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 LRRC75A-AS1Q8N1F1 130 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 MYOZ3Q8TDC0 251 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 ORAOV1Q8WV07 137 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 PHLDA1Q8WV24 401 aaPredicted RBP3.53□□□□□ -1.84
USP48-202ENST00000374730 RHPN1-AS1Q9BWJ2 59 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 VPREB3Q9UKI3 123 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 UFC1Q9Y3C8 167 aa3.53□□□□□ -1.84
USP48-202ENST00000374730 TIMM8BQ9Y5J9 83 aaPredicted RBP3.53□□□□□ -1.84
USP48-202ENST00000374730 USP9YO00507 2555 aaPredicted RBP3.53□□□□□ -1.85
USP48-202ENST00000374730 NOTCH2Q04721 2471 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 MUC4Q99102 2169 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 SIVA1O15304 175 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 ATP5LO75964 103 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 HLA-DRB4P13762 266 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 COX6B1P14854 86 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 GATA1P15976 413 aaPredicted RBP3.52□□□□□ -1.85
USP48-202ENST00000374730 EVI2AP22794 236 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 LEPP41159 167 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 BOD1L2Q8IYS8 172 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 OR9G4Q8NGQ1 327 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 DCANP1Q8TF63 244 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 C20orf78Q9BR46 151 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 MCRIP2Q9BUT9 160 aaKnown RBP3.52□□□□□ -1.85
USP48-202ENST00000374730 SMIM2Q9BVW6 85 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 DPH3P1Q9H4G8 78 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 HLA-DRB4X5D2U9 266 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 CREBBPQ92793 2442 aa3.52□□□□□ -1.85
USP48-202ENST00000374730 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 LGALS9O00182 355 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 CD5LO43866 347 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 PPP1R17O96001 155 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 LGALS1P09382 135 aaKnown RBP3.51□□□□□ -1.85
USP48-202ENST00000374730 S100A4P26447 101 aaKnown RBP3.51□□□□□ -1.85
USP48-202ENST00000374730 RPL32P62910 135 aaKnown RBP3.51□□□□□ -1.85
USP48-202ENST00000374730 SEC11AP67812 179 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 LAGE3Q14657 143 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 MPV17L2Q567V2 206 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 Q6ZQT7 251 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 TMEM158Q8WZ71 300 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 NRGNQ92686 78 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 AP1S3Q96PC3 154 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 TP73-AS1Q9UF72 201 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 PHLDA3Q9Y5J5 127 aa3.51□□□□□ -1.85
USP48-202ENST00000374730 SETD2Q9BYW2 2564 aaPredicted RBP3.51□□□□□ -1.85
USP48-202ENST00000374730 POLQO75417 2590 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 TRAV12-1A0A0B4J245 112 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 C7orf71A4D174 169 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 LINC01549A6NIU2 74 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 F6UB75 175 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 K7EQG2 157 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 TAX1BP3O14907 124 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 DPM2O94777 84 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 DUSP14O95147 198 aaKnown RBP3.5□□□□□ -1.85
USP48-202ENST00000374730 IGKCP01834 107 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 PRB1P04280 392 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 SMIM17P0DL12 118 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 IGHV4-31P0DP07 118 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 RNASE3P12724 160 aaKnown RBP3.5□□□□□ -1.85
USP48-202ENST00000374730 RNASE4P34096 147 aaKnown RBP3.5□□□□□ -1.85
USP48-202ENST00000374730 FXYD7P58549 80 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 DEFB1P60022 68 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 HSD52Q0P140 79 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 ORMDL2Q53FV1 153 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 TMEM97Q5BJF2 176 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 ZNF843Q8N446 348 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 RASL10AQ92737 203 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 UBE2E2Q96LR5 201 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 C18orf15Q96N68 181 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 ZNF702PQ9H963 129 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 HIGD1BQ9P298 99 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 APCP25054 2843 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 CSMD2Q7Z408 3487 aa3.5□□□□□ -1.85
USP48-202ENST00000374730 A0A087WW49 117 aa3.49□□□□□ -1.85
USP48-202ENST00000374730 A0A087WX48 190 aa3.49□□□□□ -1.85
USP48-202ENST00000374730 TRAV2A0A0B4J234 112 aa3.49□□□□□ -1.85
USP48-202ENST00000374730 TRAV26-2A0A0B4J265 109 aa3.49□□□□□ -1.85
USP48-202ENST00000374730 A0A0J9YX75 114 aa3.49□□□□□ -1.85
USP48-202ENST00000374730 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
USP48-202ENST00000374730 PLNP26678 52 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms