RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TMEM70Q9BUB7 260 aa11.18□□□□□ -0.62
NIPAL3-204ENST00000374399 TCAPO15273 167 aa11.18□□□□□ -0.62
NIPAL3-204ENST00000374399 PPP1R17O96001 155 aa11.18□□□□□ -0.62
NIPAL3-204ENST00000374399 IGHV3-53P01767 116 aa11.18□□□□□ -0.62
NIPAL3-204ENST00000374399 EMP1P54849 157 aa11.18□□□□□ -0.62
NIPAL3-204ENST00000374399 JOSD1Q15040 202 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-204ENST00000374399 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
NIPAL3-204ENST00000374399 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 GAGE12BA1L429 117 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 RHODO00212 210 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 GAGE7O76087 117 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 GAGE12FP0CL80 117 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 GAGE12GP0CL81 117 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 GAGE12IP0CL82 117 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 SMIM6P0DI80 62 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 Q8N976 141 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 Q8NAQ8 132 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 OR4C5Q8NGB2 326 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
NIPAL3-204ENST00000374399 KPRPQ5T749 579 aaPredicted RBP11.16□□□□□ -0.62
NIPAL3-204ENST00000374399 IGHV4-28A0A0C4DH34 117 aa11.15□□□□□ -0.62
NIPAL3-204ENST00000374399 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.62
NIPAL3-204ENST00000374399 C3orf79P0CE67 100 aa11.15□□□□□ -0.62
NIPAL3-204ENST00000374399 TRBV27A0A0K0K1C4 114 aa11.15□□□□□ -0.63
NIPAL3-204ENST00000374399 DEFB4AO15263 64 aa11.15□□□□□ -0.63
NIPAL3-204ENST00000374399 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.63
NIPAL3-204ENST00000374399 SPATA12Q7Z6I5 190 aa11.15□□□□□ -0.63
NIPAL3-204ENST00000374399 NEXN-AS1Q8NBZ9 246 aa11.15□□□□□ -0.63
NIPAL3-204ENST00000374399 LEPROTL1O95214 131 aa11.14□□□□□ -0.63
NIPAL3-204ENST00000374399 HBDP02042 147 aa11.14□□□□□ -0.63
NIPAL3-204ENST00000374399 FCER1GP30273 86 aa11.14□□□□□ -0.63
NIPAL3-204ENST00000374399 LAGE3Q14657 143 aa11.14□□□□□ -0.63
NIPAL3-204ENST00000374399 DEFB104AQ8WTQ1 72 aa11.14□□□□□ -0.63
NIPAL3-204ENST00000374399 C12orf57Q99622 126 aa11.14□□□□□ -0.63
NIPAL3-204ENST00000374399 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
NIPAL3-204ENST00000374399 RETNQ9HD89 108 aa11.13□□□□□ -0.63
NIPAL3-204ENST00000374399 HUWE1Q7Z6Z7 4374 aaKnown RBP11.13□□□□□ -0.63
NIPAL3-204ENST00000374399 TENM3Q9P273 2699 aa11.13□□□□□ -0.63
NIPAL3-204ENST00000374399 TRGV2A0A075B6R0 118 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 H7C1H1 209 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 K7EIL1 84 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 MIFP14174 115 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 KRTDAPP60985 99 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 VCYO14598 125 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 FHL2Q14192 279 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 FAM222AQ5U5X8 452 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 DKK2Q9UBU2 259 aa11.12□□□□□ -0.63
NIPAL3-204ENST00000374399 K7EMI3 77 aa11.11□□□□□ -0.63
NIPAL3-204ENST00000374399 SLC25A29Q8N8R3 303 aa11.11□□□□□ -0.63
NIPAL3-204ENST00000374399 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
NIPAL3-204ENST00000374399 LYRM9A8MSI8 78 aa11.1□□□□□ -0.63
NIPAL3-204ENST00000374399 TSHBP01222 138 aa11.1□□□□□ -0.63
NIPAL3-204ENST00000374399 DEFB130BP0DP73 79 aa11.1□□□□□ -0.63
NIPAL3-204ENST00000374399 DEFB130AP0DP74 79 aa11.1□□□□□ -0.63
NIPAL3-204ENST00000374399 TP53TG1Q9Y2A0 90 aa11.1□□□□□ -0.63
NIPAL3-204ENST00000374399 K7EQD1 137 aa11.09□□□□□ -0.63
NIPAL3-204ENST00000374399 BTF3P20290 206 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-204ENST00000374399 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
NIPAL3-204ENST00000374399 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
NIPAL3-204ENST00000374399 DNAJC30Q96LL9 226 aa11.09□□□□□ -0.63
NIPAL3-204ENST00000374399 HSPB8Q9UJY1 196 aa11.09□□□□□ -0.63
NIPAL3-204ENST00000374399 I3L3M4 83 aa11.08□□□□□ -0.64
NIPAL3-204ENST00000374399 CIDEAO60543 219 aa11.08□□□□□ -0.64
NIPAL3-204ENST00000374399 SCGB1D1O95968 90 aa11.08□□□□□ -0.64
NIPAL3-204ENST00000374399 NUDT3O95989 172 aa11.08□□□□□ -0.64
NIPAL3-204ENST00000374399 TNFRSF18Q9Y5U5 241 aa11.08□□□□□ -0.64
NIPAL3-204ENST00000374399 DNAH9Q9NYC9 4486 aa11.08□□□□□ -0.64
NIPAL3-204ENST00000374399 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
NIPAL3-204ENST00000374399 RIPPLY3P57055 190 aa11.07□□□□□ -0.64
NIPAL3-204ENST00000374399 SBSPONQ8IVN8 264 aa11.07□□□□□ -0.64
NIPAL3-204ENST00000374399 TOMM6Q96B49 74 aa11.07□□□□□ -0.64
NIPAL3-204ENST00000374399 TRBV6-4A0A1B0GX49 114 aa11.06□□□□□ -0.64
NIPAL3-204ENST00000374399 KIR2DL4Q99706 377 aa11.06□□□□□ -0.64
NIPAL3-204ENST00000374399 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
NIPAL3-204ENST00000374399 C2orf66Q6UXQ4 117 aa11.06□□□□□ -0.64
NIPAL3-204ENST00000374399 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
NIPAL3-204ENST00000374399 MAP1LC3CQ9BXW4 147 aa11.06□□□□□ -0.64
NIPAL3-204ENST00000374399 TRBV7-3A0A075B6L6 115 aa11.05□□□□□ -0.64
NIPAL3-204ENST00000374399 IFI27L1Q96BM0 104 aa11.05□□□□□ -0.64
NIPAL3-204ENST00000374399 TRGV4A0A0C4DH28 118 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 IGHV3-38A0A0C4DH36 116 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 UBE2D3P61077 147 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 UBE2D2P62837 147 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 RPL39P62891 51 aaKnown RBP11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 TEX43Q6ZNM6 134 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 PHLDA1Q8WV24 401 aaPredicted RBP11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 LINC00694P0DN24 101 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 RHOHQ15669 191 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 PET117Q6UWS5 81 aa11.04□□□□□ -0.64
NIPAL3-204ENST00000374399 GAGE12JA6NER3 117 aa11.03□□□□□ -0.64
NIPAL3-204ENST00000374399 GAGE1Q13065 139 aa11.03□□□□□ -0.64
NIPAL3-204ENST00000374399 GAGE4Q13068 117 aa11.03□□□□□ -0.64
NIPAL3-204ENST00000374399 GAGE5Q13069 117 aa11.03□□□□□ -0.64
NIPAL3-204ENST00000374399 GAGE13Q4V321 117 aa11.03□□□□□ -0.64
NIPAL3-204ENST00000374399 CHCHD7Q9BUK0 85 aa11.03□□□□□ -0.64
NIPAL3-204ENST00000374399 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
NIPAL3-204ENST00000374399 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.65
NIPAL3-204ENST00000374399 RPL36AP83881 106 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms