RNA–Protein interactions for RNA: ENST00000374037.7

SPDEF-201, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPDEF, Length 1,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-201ENST00000374037 ZNF876PQ49A33 203 aa12.78□□□□□ -0.36
SPDEF-201ENST00000374037 EDA2RQ9HAV5 297 aa12.78□□□□□ -0.36
SPDEF-201ENST00000374037 SPANXB1Q9NS25 103 aaPredicted RBP12.78□□□□□ -0.36
SPDEF-201ENST00000374037 A0A087WWL8 130 aa12.77□□□□□ -0.37
SPDEF-201ENST00000374037 MXRA5Q9NR99 2828 aa12.76□□□□□ -0.37
SPDEF-201ENST00000374037 M0QY20 66 aa12.76□□□□□ -0.37
SPDEF-201ENST00000374037 NFE4Q86UQ8 179 aa12.76□□□□□ -0.37
SPDEF-201ENST00000374037 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
SPDEF-201ENST00000374037 TRPT1Q86TN4 253 aaKnown RBP12.76□□□□□ -0.37
SPDEF-201ENST00000374037 TEX29Q8N6K0 151 aa12.76□□□□□ -0.37
SPDEF-201ENST00000374037 PEMTQ9UBM1 199 aa12.76□□□□□ -0.37
SPDEF-201ENST00000374037 SCGB2A2Q13296 93 aa12.75□□□□□ -0.37
SPDEF-201ENST00000374037 ABCA12Q86UK0 2595 aa12.75□□□□□ -0.37
SPDEF-201ENST00000374037 CENPEQ02224 2701 aa12.75□□□□□ -0.37
SPDEF-201ENST00000374037 TEX15Q9BXT5 2789 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 KNCNA6PVL3 124 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 F5H697 171 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 RBMY1A1P0DJD3 496 aaKnown RBP12.74□□□□□ -0.37
SPDEF-201ENST00000374037 RBMY1CP0DJD4 496 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 DEFB131AP59861 70 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 RBMY1FQ15415 496 aaKnown RBP12.74□□□□□ -0.37
SPDEF-201ENST00000374037 WFDC11Q8NEX6 87 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 CREBBPQ92793 2442 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 SORL1Q92673 2214 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 TRGV11A0A075B6L2 103 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 A0A0J9YY99 117 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 TEX48A0A1B0GUV7 120 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 H3BMM0 161 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 Q6ZSV7 163 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 PRO0461Q9UI25 63 aa12.74□□□□□ -0.37
SPDEF-201ENST00000374037 RPL39P62891 51 aaKnown RBP12.73□□□□□ -0.37
SPDEF-201ENST00000374037 SCGB1D4Q6XE38 83 aa12.73□□□□□ -0.37
SPDEF-201ENST00000374037 DLX4Q92988 240 aaPredicted RBP12.73□□□□□ -0.37
SPDEF-201ENST00000374037 RBMY1BA6NDE4 496 aaKnown RBP12.72□□□□□ -0.37
SPDEF-201ENST00000374037 RBMY1EA6NEQ0 496 aaKnown RBP12.72□□□□□ -0.37
SPDEF-201ENST00000374037 RBMY1DP0C7P1 496 aaKnown RBP12.72□□□□□ -0.37
SPDEF-201ENST00000374037 CD300EQ496F6 205 aaPredicted RBP12.72□□□□□ -0.37
SPDEF-201ENST00000374037 TMEM61Q8N0U2 210 aa12.72□□□□□ -0.37
SPDEF-201ENST00000374037 DUX3Q96PT4 197 aa12.72□□□□□ -0.37
SPDEF-201ENST00000374037 APCP25054 2843 aa12.72□□□□□ -0.37
SPDEF-201ENST00000374037 DNAJC9-AS1A6NH13 148 aa12.71□□□□□ -0.37
SPDEF-201ENST00000374037 ZNF56Q15929 161 aa12.71□□□□□ -0.37
SPDEF-201ENST00000374037 KLHL30-AS1Q8NEE0 82 aa12.71□□□□□ -0.37
SPDEF-201ENST00000374037 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.37
SPDEF-201ENST00000374037 H3BMG7 143 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 J3QR89 54 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 RPL24P83731 157 aaKnown RBP12.7□□□□□ -0.38
SPDEF-201ENST00000374037 DEFB114Q30KQ6 69 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 GAGE13Q4V321 117 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 PIK3CD-AS1Q5SR53 167 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 FAM74A4Q5TZK3 123 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 SLC25A29Q8N8R3 303 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 C20orf203Q8NBC4 194 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 AMELXQ99217 191 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 GCN1Q92616 2671 aaKnown RBP12.7□□□□□ -0.38
SPDEF-201ENST00000374037 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPDEF-201ENST00000374037 WFDC2Q14508 124 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
SPDEF-201ENST00000374037 I3L3M4 83 aa12.69□□□□□ -0.38
SPDEF-201ENST00000374037 KHDC1LQ5JSQ8 128 aa12.69□□□□□ -0.38
SPDEF-201ENST00000374037 LYRM7Q5U5X0 104 aa12.69□□□□□ -0.38
SPDEF-201ENST00000374037 PTH2Q96A98 100 aa12.69□□□□□ -0.38
SPDEF-201ENST00000374037 SPAG8Q99932 426 aaPredicted RBP12.69□□□□□ -0.38
SPDEF-201ENST00000374037 MAP6D1Q9H9H5 199 aa12.69□□□□□ -0.38
SPDEF-201ENST00000374037 P0DMU3 169 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 CRYBA4P53673 196 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 UBE2D3P61077 147 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 UBE2D2P62837 147 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 DYNLRB2Q8TF09 96 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 IGHV3-30P01768 117 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 IGHV3-30-5P0DP03 117 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 TSPEAR-AS2P59090 65 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 KRTAP1-1Q07627 177 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 ESM1Q9NQ30 184 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
SPDEF-201ENST00000374037 PYGO1Q9Y3Y4 419 aa12.68□□□□□ -0.38
SPDEF-201ENST00000374037 TMEM223A0PJW6 202 aa12.67□□□□□ -0.38
SPDEF-201ENST00000374037 J3QQQ9 107 aa12.67□□□□□ -0.38
SPDEF-201ENST00000374037 LEPROTO15243 131 aa12.67□□□□□ -0.38
SPDEF-201ENST00000374037 TMEM170BQ5T4T1 132 aa12.67□□□□□ -0.38
SPDEF-201ENST00000374037 ATP6V0E2Q8NHE4 81 aa12.67□□□□□ -0.38
SPDEF-201ENST00000374037 ITPR3Q14573 2671 aa12.66□□□□□ -0.38
SPDEF-201ENST00000374037 TSPAN13O95857 204 aa12.66□□□□□ -0.38
SPDEF-201ENST00000374037 NDUFA11Q86Y39 141 aa12.66□□□□□ -0.38
SPDEF-201ENST00000374037 RAX2Q96IS3 184 aa12.66□□□□□ -0.38
SPDEF-201ENST00000374037 LINC00467Q9BRT7 94 aa12.66□□□□□ -0.38
SPDEF-201ENST00000374037 FASNP49327 2511 aaKnown RBP12.66□□□□□ -0.38
SPDEF-201ENST00000374037 UNC79Q9P2D8 2635 aa12.66□□□□□ -0.38
SPDEF-201ENST00000374037 NACAE9PAV3 2078 aa12.66□□□□□ -0.38
SPDEF-201ENST00000374037 FHL3Q13643 280 aa12.65□□□□□ -0.38
SPDEF-201ENST00000374037 HIST2H2BDQ6DRA6 164 aa12.65□□□□□ -0.38
SPDEF-201ENST00000374037 EMP1P54849 157 aa12.65□□□□□ -0.38
SPDEF-201ENST00000374037 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
SPDEF-201ENST00000374037 LGALS3P17931 250 aaKnown RBP12.64□□□□□ -0.39
SPDEF-201ENST00000374037 CFAP126Q5VTH2 177 aa12.64□□□□□ -0.39
SPDEF-201ENST00000374037 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
SPDEF-201ENST00000374037 ZNF469Q96JG9 3925 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms