RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 DLX4Q92988 240 aaPredicted RBP17.52■□□□□ 0.4
CDK9-201ENST00000373264 TM2D2Q9BX73 214 aa17.52■□□□□ 0.39
CDK9-201ENST00000373264 K7EP34 96 aa17.51■□□□□ 0.39
CDK9-201ENST00000373264 Q9UF83 564 aa17.51■□□□□ 0.39
CDK9-201ENST00000373264 MYMXA0A1B0GTQ4 84 aa17.5■□□□□ 0.39
CDK9-201ENST00000373264 WFDC11Q8NEX6 87 aa17.5■□□□□ 0.39
CDK9-201ENST00000373264 HIST1H4GQ99525 98 aa17.5■□□□□ 0.39
CDK9-201ENST00000373264 TRBV27A0A0K0K1C4 114 aa17.5■□□□□ 0.39
CDK9-201ENST00000373264 SAMD5Q5TGI4 173 aa17.5■□□□□ 0.39
CDK9-201ENST00000373264 SYT8Q8NBV8 401 aa17.5■□□□□ 0.39
CDK9-201ENST00000373264 PLEKHB2Q96CS7 222 aa17.5■□□□□ 0.39
CDK9-201ENST00000373264 SPCS1Q9Y6A9 102 aa17.49■□□□□ 0.39
CDK9-201ENST00000373264 LINC01619G3V211 115 aa17.49■□□□□ 0.39
CDK9-201ENST00000373264 RPL32P62910 135 aaKnown RBP17.48■□□□□ 0.39
CDK9-201ENST00000373264 OCIAD2Q56VL3 154 aa17.48■□□□□ 0.39
CDK9-201ENST00000373264 Q8N2B8 174 aa17.48■□□□□ 0.39
CDK9-201ENST00000373264 E9PLD3 99 aa17.47■□□□□ 0.39
CDK9-201ENST00000373264 H3BMM0 161 aa17.47■□□□□ 0.39
CDK9-201ENST00000373264 MTORP42345 2549 aa17.47■□□□□ 0.39
CDK9-201ENST00000373264 TRBV7-3A0A075B6L6 115 aa17.47■□□□□ 0.39
CDK9-201ENST00000373264 SAP30O75446 220 aa17.47■□□□□ 0.39
CDK9-201ENST00000373264 ZNRF2Q8NHG8 242 aa17.47■□□□□ 0.39
CDK9-201ENST00000373264 NOTCH3Q9UM47 2321 aa17.46■□□□□ 0.39
CDK9-201ENST00000373264 TRBV6-5A0A0K0K1A5 114 aa17.46■□□□□ 0.39
CDK9-201ENST00000373264 GTF2H5Q6ZYL4 71 aa17.46■□□□□ 0.39
CDK9-201ENST00000373264 NACAE9PAV3 2078 aa17.46■□□□□ 0.39
CDK9-201ENST00000373264 ZNF815PA8K554 130 aa17.45■□□□□ 0.38
CDK9-201ENST00000373264 PMVKQ15126 192 aa17.45■□□□□ 0.38
CDK9-201ENST00000373264 A0A1W2PRX2 142 aa17.45■□□□□ 0.38
CDK9-201ENST00000373264 RIPPLY3P57055 190 aa17.45■□□□□ 0.38
CDK9-201ENST00000373264 TSPEAR-AS2P59090 65 aa17.44■□□□□ 0.38
CDK9-201ENST00000373264 ITPR2Q14571 2701 aa17.44■□□□□ 0.38
CDK9-201ENST00000373264 FABP2P12104 132 aa17.43■□□□□ 0.38
CDK9-201ENST00000373264 C12orf74Q32Q52 190 aa17.43■□□□□ 0.38
CDK9-201ENST00000373264 Q6ZSV7 163 aa17.43■□□□□ 0.38
CDK9-201ENST00000373264 C4orf3Q8WVX3 66 aa17.43■□□□□ 0.38
CDK9-201ENST00000373264 JMJD1CQ15652 2540 aa17.43■□□□□ 0.38
CDK9-201ENST00000373264 MAP6D1Q9H9H5 199 aa17.43■□□□□ 0.38
CDK9-201ENST00000373264 TRGV11A0A075B6L2 103 aa17.42■□□□□ 0.38
CDK9-201ENST00000373264 C21orf62-AS1Q17RA5 79 aa17.42■□□□□ 0.38
CDK9-201ENST00000373264 TMEM170BQ5T4T1 132 aa17.42■□□□□ 0.38
CDK9-201ENST00000373264 Q6ZSN1 163 aa17.42■□□□□ 0.38
CDK9-201ENST00000373264 TRPT1Q86TN4 253 aaKnown RBP17.42■□□□□ 0.38
CDK9-201ENST00000373264 LRRC75A-AS1Q8N1F1 130 aa17.42■□□□□ 0.38
CDK9-201ENST00000373264 CBY1Q9Y3M2 126 aa17.42■□□□□ 0.38
CDK9-201ENST00000373264 TIMM17AQ99595 171 aa17.41■□□□□ 0.38
CDK9-201ENST00000373264 PDZD2O15018 2839 aa17.41■□□□□ 0.38
CDK9-201ENST00000373264 SCGB2A2Q13296 93 aa17.41■□□□□ 0.38
CDK9-201ENST00000373264 DYNLRB2Q8TF09 96 aa17.41■□□□□ 0.38
CDK9-201ENST00000373264 IGLL5B9A064 214 aa17.4■□□□□ 0.38
CDK9-201ENST00000373264 SPAG8Q99932 426 aaPredicted RBP17.4■□□□□ 0.38
CDK9-201ENST00000373264 SCGB1D4Q6XE38 83 aa17.4■□□□□ 0.38
CDK9-201ENST00000373264 TMEM141Q96I45 108 aa17.4■□□□□ 0.38
CDK9-201ENST00000373264 ESM1Q9NQ30 184 aa17.4■□□□□ 0.38
CDK9-201ENST00000373264 SETXQ7Z333 2677 aaKnown RBP17.4■□□□□ 0.38
CDK9-201ENST00000373264 DEFB114Q30KQ6 69 aa17.39■□□□□ 0.37
CDK9-201ENST00000373264 CEMP1Q6PRD7 247 aaPredicted RBP17.39■□□□□ 0.37
CDK9-201ENST00000373264 PEMTQ9UBM1 199 aa17.39■□□□□ 0.37
CDK9-201ENST00000373264 DNAJC9-AS1A6NH13 148 aa17.38■□□□□ 0.37
CDK9-201ENST00000373264 TAL2Q16559 108 aa17.38■□□□□ 0.37
CDK9-201ENST00000373264 IGHV3-64A0A075B6Q5 118 aa17.38■□□□□ 0.37
CDK9-201ENST00000373264 NSUN5P1Q3KNT7 163 aa17.37■□□□□ 0.37
CDK9-201ENST00000373264 C20orf203Q8NBC4 194 aa17.37■□□□□ 0.37
CDK9-201ENST00000373264 RAX2Q96IS3 184 aa17.37■□□□□ 0.37
CDK9-201ENST00000373264 I3L3M4 83 aa17.37■□□□□ 0.37
CDK9-201ENST00000373264 RNASE13Q5GAN3 156 aaKnown RBP17.36■□□□□ 0.37
CDK9-201ENST00000373264 A8MTW9 85 aa17.36■□□□□ 0.37
CDK9-201ENST00000373264 ZNF479Q96JC4 524 aa17.35■□□□□ 0.37
CDK9-201ENST00000373264 MRPL16Q9NX20 251 aaKnown RBP17.35■□□□□ 0.37
CDK9-201ENST00000373264 LINC01587Q99440 93 aa17.35■□□□□ 0.37
CDK9-201ENST00000373264 MTURNQ8N3F0 131 aa17.34■□□□□ 0.37
CDK9-201ENST00000373264 XCL2Q9UBD3 114 aa17.34■□□□□ 0.37
CDK9-201ENST00000373264 CD28P10747 220 aa17.33■□□□□ 0.37
CDK9-201ENST00000373264 RHOHQ15669 191 aa17.33■□□□□ 0.37
CDK9-201ENST00000373264 FAM104AQ969W3 186 aa17.33■□□□□ 0.37
CDK9-201ENST00000373264 AZU1P20160 251 aa17.33■□□□□ 0.36
CDK9-201ENST00000373264 SRSF9Q13242 221 aaKnown RBP eCLIP17.33■□□□□ 0.36
CDK9-201ENST00000373264 SFTA2Q6UW10 78 aa17.33■□□□□ 0.36
CDK9-201ENST00000373264 IGLV4-3A0A075B6K6 122 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 A0A0J9YXV3 536 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 ODF3L2Q3SX64 289 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 IGHV3OR16-12A0A075B7B8 117 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 PCP4P48539 62 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 C11orf72Q8NBR9 251 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 OR5A1Q8NGJ0 315 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 VPS25Q9BRG1 176 aa17.32■□□□□ 0.36
CDK9-201ENST00000373264 A0A0J9YY99 117 aa17.31■□□□□ 0.36
CDK9-201ENST00000373264 M0R2P5 195 aa17.31■□□□□ 0.36
CDK9-201ENST00000373264 AMELXQ99217 191 aa17.31■□□□□ 0.36
CDK9-201ENST00000373264 IGHV3-38A0A0C4DH36 116 aa17.31■□□□□ 0.36
CDK9-201ENST00000373264 CFAP126Q5VTH2 177 aa17.31■□□□□ 0.36
CDK9-201ENST00000373264 ANK3Q12955 4377 aaKnown RBP17.31■□□□□ 0.36
CDK9-201ENST00000373264 HERVK_113P61574 105 aa17.3■□□□□ 0.36
CDK9-201ENST00000373264 HELZ2Q9BYK8 2649 aaKnown RBP17.3■□□□□ 0.36
CDK9-201ENST00000373264 H3BMG7 143 aa17.3■□□□□ 0.36
CDK9-201ENST00000373264 PAPPA-AS1Q5QFB9 102 aa17.29■□□□□ 0.36
CDK9-201ENST00000373264 RRN3P1Q2M238 152 aa17.29■□□□□ 0.36
CDK9-201ENST00000373264 A0A1B0GWB2 263 aa17.28■□□□□ 0.36
CDK9-201ENST00000373264 LINC01549A6NIU2 74 aa17.28■□□□□ 0.36
CDK9-201ENST00000373264 J3QQQ9 107 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms