RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 TRAV21A0A0B4J279 112 aa13.74□□□□□ -0.21
MMP9-201ENST00000372330 IGHV1-69P01742 117 aa13.74□□□□□ -0.21
MMP9-201ENST00000372330 ZNF22P17026 224 aaPredicted RBP13.74□□□□□ -0.21
MMP9-201ENST00000372330 M0R1W7 72 aa13.74□□□□□ -0.21
MMP9-201ENST00000372330 CXCL5P42830 114 aa13.74□□□□□ -0.21
MMP9-201ENST00000372330 UBE2E1P51965 193 aa13.74□□□□□ -0.21
MMP9-201ENST00000372330 C11orf71Q6IPW1 123 aa13.73□□□□□ -0.21
MMP9-201ENST00000372330 A0A0J9YXY3 114 aa13.73□□□□□ -0.21
MMP9-201ENST00000372330 ODF3BA8MYP8 253 aa13.73□□□□□ -0.21
MMP9-201ENST00000372330 COX7CP15954 63 aa13.73□□□□□ -0.21
MMP9-201ENST00000372330 CRYGAP11844 174 aa13.72□□□□□ -0.21
MMP9-201ENST00000372330 RPL39P62891 51 aaKnown RBP13.72□□□□□ -0.21
MMP9-201ENST00000372330 CEMP1Q6PRD7 247 aaPredicted RBP13.72□□□□□ -0.21
MMP9-201ENST00000372330 LINC00477Q96M19 166 aa13.72□□□□□ -0.21
MMP9-201ENST00000372330 UBTD1Q9HAC8 227 aa13.72□□□□□ -0.21
MMP9-201ENST00000372330 LINC00527Q9UJ94 153 aa13.72□□□□□ -0.21
MMP9-201ENST00000372330 IGHV3OR16-8A0A075B7F1 116 aa13.7□□□□□ -0.22
MMP9-201ENST00000372330 PRR9Q5T870 116 aa13.7□□□□□ -0.22
MMP9-201ENST00000372330 GAGE2AQ6NT46 116 aa13.7□□□□□ -0.22
MMP9-201ENST00000372330 SVEP1Q4LDE5 3571 aa13.69□□□□□ -0.22
MMP9-201ENST00000372330 TRBV27A0A0K0K1C4 114 aa13.69□□□□□ -0.22
MMP9-201ENST00000372330 SDIM1Q6ZPB5 146 aa13.69□□□□□ -0.22
MMP9-201ENST00000372330 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
MMP9-201ENST00000372330 IGHV3-35A0A0C4DH35 117 aa13.68□□□□□ -0.22
MMP9-201ENST00000372330 NXPH4O95158 308 aa13.68□□□□□ -0.22
MMP9-201ENST00000372330 PRSS2P07478 247 aa13.68□□□□□ -0.22
MMP9-201ENST00000372330 KIF25-AS1Q9Y6Z4 181 aa13.68□□□□□ -0.22
MMP9-201ENST00000372330 LINC00315P59091 139 aa13.68□□□□□ -0.22
MMP9-201ENST00000372330 LITAFQ99732 161 aa13.68□□□□□ -0.22
MMP9-201ENST00000372330 CLPSL1A2RUU4 121 aa13.67□□□□□ -0.22
MMP9-201ENST00000372330 C5orf38Q86SI9 138 aa13.67□□□□□ -0.22
MMP9-201ENST00000372330 CLEC2BQ92478 149 aa13.67□□□□□ -0.22
MMP9-201ENST00000372330 ZFAND2AQ8N6M9 145 aa13.67□□□□□ -0.22
MMP9-201ENST00000372330 DCANP1Q8TF63 244 aa13.67□□□□□ -0.22
MMP9-201ENST00000372330 ITPR1Q14643 2758 aa13.66□□□□□ -0.22
MMP9-201ENST00000372330 TRBV6-5A0A0K0K1A5 114 aa13.66□□□□□ -0.22
MMP9-201ENST00000372330 I3L3M4 83 aa13.66□□□□□ -0.22
MMP9-201ENST00000372330 NDPQ00604 133 aa13.66□□□□□ -0.22
MMP9-201ENST00000372330 PRORYQ9H606 182 aa13.66□□□□□ -0.22
MMP9-201ENST00000372330 SPTBN1Q01082 2364 aaKnown RBP13.66□□□□□ -0.22
MMP9-201ENST00000372330 VMO1Q7Z5L0 202 aa13.65□□□□□ -0.22
MMP9-201ENST00000372330 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
MMP9-201ENST00000372330 MED13LQ71F56 2210 aa13.65□□□□□ -0.22
MMP9-201ENST00000372330 IGHV3-66A0A0C4DH42 116 aa13.65□□□□□ -0.22
MMP9-201ENST00000372330 RHOHQ15669 191 aa13.65□□□□□ -0.22
MMP9-201ENST00000372330 C9orf139Q6ZV77 190 aa13.65□□□□□ -0.22
MMP9-201ENST00000372330 TRAV8-3A0A0A6YYJ7 113 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 SPRY2O43597 315 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
MMP9-201ENST00000372330 HIVEP3Q5T1R4 2406 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 ATOX1O00244 68 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 MIAQ16674 131 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 Q8N6K4 173 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 PEMTQ9UBM1 199 aa13.64□□□□□ -0.23
MMP9-201ENST00000372330 KLK5Q9Y337 293 aaPredicted RBP13.64□□□□□ -0.23
MMP9-201ENST00000372330 A0A1W2PPR1 153 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 C15orf32Q32M92 178 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 SUMO4Q6EEV6 95 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 TMEM61Q8N0U2 210 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 OVOL1O14753 267 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 IGHV3-30-3P0DP02 117 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 KLK9Q2XQG4 91 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 MINOS1Q5TGZ0 78 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 SMCR5Q8TEV8 140 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 ITLN2Q8WWU7 325 aaPredicted RBP13.63□□□□□ -0.23
MMP9-201ENST00000372330 C2orf48Q96LS8 159 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 KLK9Q9UKQ9 250 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 MINOS1-NBL1R4GNA1 71 aa13.63□□□□□ -0.23
MMP9-201ENST00000372330 IGHV3-64A0A075B6Q5 118 aa13.62□□□□□ -0.23
MMP9-201ENST00000372330 ZFP36P26651 326 aaKnown RBP13.62□□□□□ -0.23
MMP9-201ENST00000372330 U3KQE9 123 aa13.62□□□□□ -0.23
MMP9-201ENST00000372330 IGF1P05019 195 aa13.62□□□□□ -0.23
MMP9-201ENST00000372330 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
MMP9-201ENST00000372330 EDA2RQ9HAV5 297 aa13.62□□□□□ -0.23
MMP9-201ENST00000372330 TRACP01848 142 aa13.61□□□□□ -0.23
MMP9-201ENST00000372330 HIST1H4AP62805 103 aaKnown RBP13.61□□□□□ -0.23
MMP9-201ENST00000372330 APRG1Q8IVJ8 170 aa13.61□□□□□ -0.23
MMP9-201ENST00000372330 WNK2Q9Y3S1 2297 aa13.6□□□□□ -0.23
MMP9-201ENST00000372330 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
MMP9-201ENST00000372330 IGHV3OR16-13A0A075B7E8 117 aa13.6□□□□□ -0.23
MMP9-201ENST00000372330 IGHV3-74A0A0B4J1X5 117 aa13.6□□□□□ -0.23
MMP9-201ENST00000372330 GNRH2O43555 120 aa13.6□□□□□ -0.23
MMP9-201ENST00000372330 PF4V1P10720 104 aa13.6□□□□□ -0.23
MMP9-201ENST00000372330 TMEM258P61165 79 aa13.6□□□□□ -0.23
MMP9-201ENST00000372330 FAM110DQ8TAY7 271 aaPredicted RBP13.6□□□□□ -0.23
MMP9-201ENST00000372330 SIRPDQ9H106 197 aa13.59□□□□□ -0.23
MMP9-201ENST00000372330 A0A0J9YXV3 536 aa13.59□□□□□ -0.23
MMP9-201ENST00000372330 F5H697 171 aa13.59□□□□□ -0.23
MMP9-201ENST00000372330 ADAMTSL4-AS1Q5T5F5 129 aa13.59□□□□□ -0.23
MMP9-201ENST00000372330 IGHV7-81A0A0B4J1V7 117 aa13.58□□□□□ -0.23
MMP9-201ENST00000372330 RNASE4P34096 147 aaKnown RBP13.58□□□□□ -0.23
MMP9-201ENST00000372330 DAND5Q8N907 189 aa13.58□□□□□ -0.23
MMP9-201ENST00000372330 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.23
MMP9-201ENST00000372330 AKAP6Q13023 2319 aa13.58□□□□□ -0.24
MMP9-201ENST00000372330 C20orf203Q8NBC4 194 aa13.58□□□□□ -0.24
MMP9-201ENST00000372330 FAM19A4Q96LR4 140 aa13.58□□□□□ -0.24
MMP9-201ENST00000372330 OPRPNQ99935 248 aaPredicted RBP13.58□□□□□ -0.24
MMP9-201ENST00000372330 TIMM17BO60830 172 aa13.57□□□□□ -0.24
MMP9-201ENST00000372330 NDUFA12Q9UI09 145 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms