RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TMEM141Q96I45 108 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 AGRNO00468 2067 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 IGHV4OR15-8A0A075B7B6 117 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 A0A087WW49 117 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 J3KRW8 73 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 NXPH4O95158 308 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 TSPAN13O95857 204 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 IGF1P05019 195 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 KRTAP21-3Q3LHN1 58 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 TEN1Q86WV5 123 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 GLMPQ8WWB7 406 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 C16orf92Q96LL3 132 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 CDIP1Q9H305 208 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 TMEM262E9PQX1 116 aa8.57□□□□□ -1.04
TSPAN1-201ENST00000372003 ZFAND2AQ8N6M9 145 aa8.57□□□□□ -1.04
TSPAN1-201ENST00000372003 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
TSPAN1-201ENST00000372003 FAM19A4Q96LR4 140 aa8.57□□□□□ -1.04
TSPAN1-201ENST00000372003 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 FAM223BA6NKX1 122 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 CD28P10747 220 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 CRIP2P52943 208 aaPredicted RBP8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 CLEC19AQ6UXS0 136 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 NDUFA11Q86Y39 141 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 FAM223AQ8IWN6 122 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 OR10J6PQ8NGY7 276 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 TIMM17AQ99595 171 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 PHLDA3Q9Y5J5 127 aa8.56□□□□□ -1.04
TSPAN1-201ENST00000372003 A0A0J9YY99 117 aa8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 INSL3P51460 131 aa8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 ATP5G2Q06055 141 aa8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 PMVKQ15126 192 aa8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 KHDC1LQ5JSQ8 128 aa8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 GEMIN7Q9H840 131 aaKnown RBP8.55□□□□□ -1.04
TSPAN1-201ENST00000372003 A8MWV9 139 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 BRI3O95415 125 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 SPINK8P0C7L1 97 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 PF4V1P10720 104 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 PSMB2P49721 201 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 CFHR3Q02985 330 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 PRR9Q5T870 116 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 GPHB5Q86YW7 130 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 SLC25A29Q8N8R3 303 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 CITED2Q99967 270 aaPredicted RBP8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 KLK15Q9H2R5 256 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 IGHV3-35A0A0C4DH35 117 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 A0A1W2PRX2 142 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 CRYGDP07320 174 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 Q6ZUT4 128 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 ZNF580Q9UK33 172 aa8.54□□□□□ -1.04
TSPAN1-201ENST00000372003 COL6A5A8TX70 2615 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 IGHV3-66A0A0C4DH42 116 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 NDUFA4O00483 81 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 SOCS3O14543 225 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 VCYO14598 125 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 IGHV3-30P01768 117 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 ZNF688P0C7X2 276 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 IGHV3-30-5P0DP03 117 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 NSUN5P1Q3KNT7 163 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 C14orf178Q8N769 122 aaPredicted RBP8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 CITED1Q99966 193 aa8.53□□□□□ -1.04
TSPAN1-201ENST00000372003 TRBV6-5A0A0K0K1A5 114 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 IGLV1-40P01703 118 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 ELANEP08246 267 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 PSMB8P28062 276 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 ANXA2RQ3ZCQ2 193 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 CARD19Q96LW7 228 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 PRO1854Q9UHT4 67 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 KIF25-AS1Q9Y6Z4 181 aa8.52□□□□□ -1.05
TSPAN1-201ENST00000372003 H3BUA1 57 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 MGPP08493 103 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 P0DMU3 169 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 FAM231AP0DMU4 169 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 FAM231CP0DMU5 169 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 ZFP2Q6ZN57 461 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 SPATA3Q8NHX4 192 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 KIR2DL4Q99706 377 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 TCL1BO95988 128 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 CFC1P0CG37 223 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 RNASE3P12724 160 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms